RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ZNF396Q96N95 335 aaPredicted RBP15.4■□□□□ 0.06
NFKB1-202ENST00000394820 ERCC6LQ2NKX8 1250 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 SPECC1Q5M775 1068 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 ZNF710Q8N1W2 664 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 DCAF5Q96JK2 942 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 TRIM29Q14134 588 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 CADPS2Q86UW7 1296 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 ZCRB1Q8TBF4 217 aaKnown RBP15.39■□□□□ 0.05
NFKB1-202ENST00000394820 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 KCNF1Q9H3M0 494 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 ANO10Q9NW15 660 aa15.39■□□□□ 0.05
NFKB1-202ENST00000394820 TERF1P54274 439 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 ST7Q9NRC1 585 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 GJB4Q9NTQ9 266 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 ARGLU1Q9NWB6 273 aaPredicted RBP15.38■□□□□ 0.05
NFKB1-202ENST00000394820 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
NFKB1-202ENST00000394820 AOX1Q06278 1338 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 USP27XA6NNY8 438 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 ARHGAP29Q52LW3 1261 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 HIP1O00291 1037 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 C8orf76Q96K31 380 aa15.38■□□□□ 0.05
NFKB1-202ENST00000394820 PHACTR2O75167 634 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 PPARDQ03181 441 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 TNNI3KQ59H18 835 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 FPGT-TNNI3KV9GXZ4 949 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 SLC3A2P08195 630 aaKnown RBP15.37■□□□□ 0.05
NFKB1-202ENST00000394820 FAM193AP78312 1265 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 KRT222Q8N1A0 295 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 CCDC66A2RUB6 948 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
NFKB1-202ENST00000394820 STX1AQ16623 288 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 TMCO3Q6UWJ1 677 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 C11orf57Q6ZUT1 292 aaPredicted RBP15.37■□□□□ 0.05
NFKB1-202ENST00000394820 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 NUP133Q8WUM0 1156 aa15.37■□□□□ 0.05
NFKB1-202ENST00000394820 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
NFKB1-202ENST00000394820 ORC3Q9UBD5 711 aaPredicted RBP15.36■□□□□ 0.05
NFKB1-202ENST00000394820 SMTNL1A8MU46 457 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 LRRC24Q50LG9 513 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 CLEC17AQ6ZS10 378 aa15.36■□□□□ 0.05
NFKB1-202ENST00000394820 GNG11P61952 73 aa15.35■□□□□ 0.05
NFKB1-202ENST00000394820 NOL10Q9BSC4 688 aaKnown RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 UTP14AQ9BVJ6 771 aaKnown RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 PUS3Q9BZE2 481 aaKnown RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 PTPN12Q05209 780 aaKnown RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 DMTNQ08495 405 aa15.35■□□□□ 0.05
NFKB1-202ENST00000394820 MCM6Q14566 821 aa15.35■□□□□ 0.05
NFKB1-202ENST00000394820 CPLX2Q6PUV4 134 aaKnown RBP15.35■□□□□ 0.05
NFKB1-202ENST00000394820 USP28Q96RU2 1077 aa15.35■□□□□ 0.05
NFKB1-202ENST00000394820 EPC1Q9H2F5 836 aa15.35■□□□□ 0.05
NFKB1-202ENST00000394820 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
NFKB1-202ENST00000394820 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
NFKB1-202ENST00000394820 GPIHBP1Q8IV16 184 aa15.34■□□□□ 0.05
NFKB1-202ENST00000394820 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
NFKB1-202ENST00000394820 TOPAZ1Q8N9V7 1692 aa15.34■□□□□ 0.05
NFKB1-202ENST00000394820 NWD1Q149M9 1564 aa15.34■□□□□ 0.05
NFKB1-202ENST00000394820 SYNE4Q8N205 404 aa15.33■□□□□ 0.05
NFKB1-202ENST00000394820 PCMTD1Q96MG8 357 aaPredicted RBP15.33■□□□□ 0.05
NFKB1-202ENST00000394820 C1orf167Q5SNV9 1468 aa15.33■□□□□ 0.05
NFKB1-202ENST00000394820 RPS6KB1P23443 525 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 CEP126Q9P2H0 1117 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 KLF18A0A0U1RQI7 1052 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 SLU7O95391 586 aaKnown RBP15.33■□□□□ 0.04
NFKB1-202ENST00000394820 MTX1Q13505 466 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 TTC14Q96N46 770 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 HINFPQ9BQA5 517 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 PAXBP1Q9Y5B6 917 aa15.33■□□□□ 0.04
NFKB1-202ENST00000394820 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 TOP1P11387 765 aaKnown RBP15.32■□□□□ 0.04
NFKB1-202ENST00000394820 NCBP1Q09161 790 aaKnown RBP15.32■□□□□ 0.04
NFKB1-202ENST00000394820 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
NFKB1-202ENST00000394820 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 OGFRQ9NZT2 677 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 LMAN1P49257 510 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 KRT32Q14532 448 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 SLC4A8Q2Y0W8 1093 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 CCDC102AQ96A19 550 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 CLSTN2Q9H4D0 955 aa15.32■□□□□ 0.04
NFKB1-202ENST00000394820 ZSCAN20P17040 1043 aaPredicted RBP15.32■□□□□ 0.04
NFKB1-202ENST00000394820 STX17P56962 302 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 UBASH3AP57075 661 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 NECTIN1Q15223 517 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 GTPBP4Q9BZE4 634 aaKnown RBP15.31■□□□□ 0.04
NFKB1-202ENST00000394820 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
NFKB1-202ENST00000394820 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms