RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 TMEM63CQ9P1W3 806 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 SLIT2O94813 1529 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 NRAPQ86VF7 1730 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 TSGA10IPQ3SY00 556 aa25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 USP48Q86UV5 1035 aa25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 RIC1Q4ADV7 1423 aa25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 VPS37CA5D8V6 355 aaPredicted RBP25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 UBAP1LF5GYI3 381 aa25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 Q6ZUG5 572 aa25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 MYH14Q7Z406 1995 aaKnown RBP25.28■■□□□ 1.64
SPTBN4-203ENST00000392023 MCAMP43121 646 aa25.27■■□□□ 1.64
SPTBN4-203ENST00000392023 CHST3Q7LGC8 479 aa25.27■■□□□ 1.64
SPTBN4-203ENST00000392023 RFX7Q2KHR2 1363 aa25.27■■□□□ 1.64
SPTBN4-203ENST00000392023 FBXO3Q9UK99 471 aa25.27■■□□□ 1.64
SPTBN4-203ENST00000392023 CAMTA2O94983 1202 aa25.26■■□□□ 1.63
SPTBN4-203ENST00000392023 NIP7Q9Y221 180 aaKnown RBP eCLIP25.26■■□□□ 1.63
SPTBN4-203ENST00000392023 PUS7LQ9H0K6 701 aaKnown RBP25.25■■□□□ 1.63
SPTBN4-203ENST00000392023 F13A1P00488 732 aa25.25■■□□□ 1.63
SPTBN4-203ENST00000392023 VGLL2Q8N8G2 317 aa25.25■■□□□ 1.63
SPTBN4-203ENST00000392023 ESPNB1AK53 854 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 PDE8BO95263 885 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 HSP90B1P14625 803 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 HAND2P61296 217 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 FGD1P98174 961 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 KRT32Q14532 448 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 BARGINQ6ZT62 677 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 FERMT3Q86UX7 667 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 BRF1Q92994 677 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 MTMR6Q9Y217 621 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 A0A0U1RQG5 324 aaPredicted RBP25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 PPFIA3O75145 1194 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 LARP1BQ659C4 914 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 ANKRD36CQ5JPF3 1778 aa25.24■■□□□ 1.63
SPTBN4-203ENST00000392023 MYH3P11055 1940 aa25.23■■□□□ 1.63
SPTBN4-203ENST00000392023 SYCE3A1L190 88 aa25.23■■□□□ 1.63
SPTBN4-203ENST00000392023 PHKA1P46020 1223 aa25.23■■□□□ 1.63
SPTBN4-203ENST00000392023 ANKRD1Q15327 319 aa25.23■■□□□ 1.63
SPTBN4-203ENST00000392023 UTP14AQ9BVJ6 771 aaKnown RBP25.23■■□□□ 1.63
SPTBN4-203ENST00000392023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.23■■□□□ 1.63
SPTBN4-203ENST00000392023 FIBPO43427 364 aa25.22■■□□□ 1.63
SPTBN4-203ENST00000392023 FAM173BQ6P4H8 233 aa25.22■■□□□ 1.63
SPTBN4-203ENST00000392023 DSCC1Q9BVC3 393 aa25.22■■□□□ 1.63
SPTBN4-203ENST00000392023 JAK2O60674 1132 aa25.22■■□□□ 1.63
SPTBN4-203ENST00000392023 DNM1Q05193 864 aaKnown RBP25.22■■□□□ 1.63
SPTBN4-203ENST00000392023 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
SPTBN4-203ENST00000392023 E7EWF7 191 aa25.21■■□□□ 1.63
SPTBN4-203ENST00000392023 FOXP2O15409 715 aa25.21■■□□□ 1.63
SPTBN4-203ENST00000392023 CCDC102BQ68D86 513 aa25.21■■□□□ 1.63
SPTBN4-203ENST00000392023 CDC37L1Q7L3B6 337 aa25.2■■□□□ 1.62
SPTBN4-203ENST00000392023 LINC00116Q8NCU8 138 aa25.2■■□□□ 1.62
SPTBN4-203ENST00000392023 NAP1L2Q9ULW6 460 aaPredicted RBP25.2■■□□□ 1.62
SPTBN4-203ENST00000392023 IDH1O75874 414 aaKnown RBP25.2■■□□□ 1.62
SPTBN4-203ENST00000392023 MPHOSPH8Q99549 860 aa25.2■■□□□ 1.62
SPTBN4-203ENST00000392023 APOBRQ0VD83 1088 aa25.19■■□□□ 1.62
SPTBN4-203ENST00000392023 DDX11Q96FC9 970 aa25.19■■□□□ 1.62
SPTBN4-203ENST00000392023 PIH1D3Q9NQM4 214 aaKnown RBP25.19■■□□□ 1.62
SPTBN4-203ENST00000392023 SLC9C2Q5TAH2 1124 aa25.18■■□□□ 1.62
SPTBN4-203ENST00000392023 ALDH8A1Q9H2A2 487 aaPredicted RBP25.18■■□□□ 1.62
SPTBN4-203ENST00000392023 ZNF445P59923 1031 aa25.18■■□□□ 1.62
SPTBN4-203ENST00000392023 EP400Q96L91 3159 aa25.18■■□□□ 1.62
SPTBN4-203ENST00000392023 FGAP02671 866 aa25.17■■□□□ 1.62
SPTBN4-203ENST00000392023 DHX32Q7L7V1 743 aaKnown RBP25.17■■□□□ 1.62
SPTBN4-203ENST00000392023 GPHNQ9NQX3 736 aaPredicted RBP25.17■■□□□ 1.62
SPTBN4-203ENST00000392023 MYO5AQ9Y4I1 1855 aaKnown RBP25.17■■□□□ 1.62
SPTBN4-203ENST00000392023 NTSR2O95665 410 aa25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 FOSBP53539 338 aa25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 CCT2P78371 535 aaKnown RBP25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 RBSNQ9H1K0 784 aa25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 ISY1Q9ULR0 285 aaKnown RBP25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 WTIPA6NIX2 430 aaPredicted RBP25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 MBD3O95983 291 aa25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 SCRN1Q12765 414 aa25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 GTF3C6Q969F1 213 aa25.16■■□□□ 1.62
SPTBN4-203ENST00000392023 LAMA4Q16363 1823 aa25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 GPAA1O43292 621 aa25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 APPBP2Q92624 585 aa25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 BCL9LQ86UU0 1499 aa25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 AKAP11Q9UKA4 1901 aa25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 NASPP49321 788 aaPredicted RBP25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 PUM3Q15397 648 aaKnown RBP25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 NCOA5Q9HCD5 579 aaKnown RBP25.15■■□□□ 1.62
SPTBN4-203ENST00000392023 C3orf67Q6ZVT6 689 aa25.14■■□□□ 1.62
SPTBN4-203ENST00000392023 SMARCC1Q92922 1105 aaPredicted RBP25.14■■□□□ 1.62
SPTBN4-203ENST00000392023 LPIN2Q92539 896 aa25.14■■□□□ 1.61
SPTBN4-203ENST00000392023 WWC3Q9ULE0 1092 aa25.14■■□□□ 1.61
SPTBN4-203ENST00000392023 ZFYP08048 801 aaPredicted RBP25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 EXOSC10Q01780 885 aaKnown RBP25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 CCDC24Q8N4L8 307 aa25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 FGFR2P21802 821 aa25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 LRRFIP1Q32MZ4 808 aaKnown RBP25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 ERFEQ4G0M1 354 aa25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 PARP10Q53GL7 1025 aa25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 DENND2AQ9ULE3 1009 aa25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 IQSEC3Q9UPP2 1182 aaPredicted RBP25.13■■□□□ 1.61
SPTBN4-203ENST00000392023 MROH5Q6ZUA9 1318 aa25.12■■□□□ 1.61
SPTBN4-203ENST00000392023 BCAMP50895 628 aa25.12■■□□□ 1.61
SPTBN4-203ENST00000392023 CCDC152Q4G0S7 254 aa25.12■■□□□ 1.61
SPTBN4-203ENST00000392023 ADD2P35612 726 aa25.12■■□□□ 1.61
SPTBN4-203ENST00000392023 VPS72Q15906 364 aa25.12■■□□□ 1.61
SPTBN4-203ENST00000392023 ATP6V1DQ9Y5K8 247 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms