RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 MAP3K6O95382 1288 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 SWI5Q1ZZU3 235 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 C1orf53Q5VUE5 145 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 ACAD11Q709F0 780 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 GGNQ86UU5 652 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 HOMEZQ8IX15 550 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 FBXL6Q8N531 539 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 HSH2DQ96JZ2 352 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 C20orf173Q96LM9 149 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 HINFPQ9BQA5 517 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 METTL22Q9BUU2 404 aaPredicted RBP3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZNF358Q9NW07 568 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 FAM53CQ9NYF3 392 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 SCHIP1Q9P0W5 487 aaPredicted RBP3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZMIZ1Q9ULJ6 1067 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 HIF3AQ9Y2N7 669 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 FAM69CQ0P6D2 419 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 PLCL1Q15111 1095 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 TMEM164Q5U3C3 297 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 TNS4Q8IZW8 715 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 RETREG2Q8NC44 543 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZNF280CQ8ND82 737 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 GLIS3Q8NEA6 775 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 GAS2L2Q8NHY3 880 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 STK32AQ8WU08 396 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 SUSD3Q96L08 255 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 MUC3BQ9H195 1237 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 USTQ9Y2C2 406 aa3.16□□□□□ -1.9
RNU6-440P-201ENST00000390882 ATAD2Q6PL18 1390 aa3.15□□□□□ -1.9
RNU6-440P-201ENST00000390882 SERTM1A2A2V5 107 aa3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 TMEM88BA6NKF7 163 aa3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 WISP1O95388 367 aa3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 PDIA4P13667 645 aaKnown RBP3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 HOXA5P20719 270 aa3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 CD68P34810 354 aaPredicted RBP3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 GPLD1P80108 840 aa3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 GDF6Q6KF10 455 aaPredicted RBP3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 KIAA1211Q6ZU35 1233 aa3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 DHX32Q7L7V1 743 aaKnown RBP3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 TSEN2Q8NCE0 465 aaKnown RBP3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 CLP1Q92989 425 aaKnown RBP3.15□□□□□ -1.91
RNU6-440P-201ENST00000390882 SUV39H1O43463 412 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 FOXD2O60548 495 aaPredicted RBP3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 IGFBP4P22692 258 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 ARID4AP29374 1257 aaPredicted RBP3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 WEE1P30291 646 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 EPHA4P54764 986 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 MLLT1Q03111 559 aaPredicted RBP3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 BTLAQ7Z6A9 289 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 CACTIN-AS1Q8N1I8 211 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 STAG2Q8N3U4 1231 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 GALNT11Q8NCW6 608 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 SCG3Q8WXD2 468 aaKnown RBP3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 COL26A1Q96A83 441 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 BORCS6Q96GS4 357 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 TRAIPQ9BWF2 469 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 SLC5A6Q9Y289 635 aa3.14□□□□□ -1.91
RNU6-440P-201ENST00000390882 CARNS1A5YM72 827 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 MEGF11A6BM72 1044 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 PRMT3O60678 531 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 LGR5O75473 907 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 EIF2AK2P19525 551 aaKnown RBP3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 SSFA2P28290 1259 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 MLANAQ16655 118 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 DUOXA2Q1HG44 320 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 ANKRD34AQ69YU3 496 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 B4GALNT3Q6L9W6 998 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 HFE2Q6ZVN8 426 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 SLC9A9Q8IVB4 645 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 CHMP7Q8WUX9 453 aaPredicted RBP3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 PLD4Q96BZ4 506 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 PRIMPOLQ96LW4 560 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 TSPAN10Q9H1Z9 355 aaPredicted RBP3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 RC3H2Q9HBD1 1191 aaKnown RBP3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 CHMP3Q9Y3E7 222 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 PPME1Q9Y570 386 aa3.13□□□□□ -1.91
RNU6-440P-201ENST00000390882 FOXO3O43524 673 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 C21orf2O43822 256 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 PPP1R12BO60237 982 aaPredicted RBP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 BRD1O95696 1058 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 ATP2B4P23634 1241 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 MAP4P27816 1152 aaKnown RBP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 PREPP48147 710 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 PSMA6P60900 246 aaKnown RBP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 OCLNQ16625 522 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 TBCELQ5QJ74 424 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 SH3PXD2AQ5TCZ1 1133 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 SYDE1Q6ZW31 735 aaPredicted RBP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 VTI1AQ96AJ9 217 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 C2orf49Q9BVC5 232 aaPredicted RBP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 KCNK4Q9NYG8 393 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 CXXC1Q9P0U4 656 aaPredicted RBP3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 SLAIN2Q9P270 581 aa3.12□□□□□ -1.91
RNU6-440P-201ENST00000390882 NRLP54845 237 aa3.11□□□□□ -1.91
RNU6-440P-201ENST00000390882 HIF1AQ16665 826 aa3.11□□□□□ -1.91
RNU6-440P-201ENST00000390882 LSRQ86X29 649 aaPredicted RBP3.11□□□□□ -1.91
RNU6-440P-201ENST00000390882 STK11IPQ8N1F8 1099 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms