RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 IGBP1P78318 339 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 CAMK2GQ13555 558 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 RAB33AQ14088 237 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 SEZ6Q53EL9 994 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 RNF187Q5TA31 235 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 COL13A1Q5TAT6 717 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 NBPF6Q5VWK0 638 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 PRPF40BQ6NWY9 871 aaKnown RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 FILIP1Q7Z7B0 1213 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 PGBD3Q8N328 593 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 PHC3Q8NDX5 983 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 FBXO27Q8NI29 283 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 NKD1Q969G9 470 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 PMEPA1Q969W9 287 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 RHOVQ96L33 236 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 RNPC3Q96LT9 517 aaKnown RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 NBPF4Q96M43 638 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 NSUN5Q96P11 429 aaKnown RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 HHIPQ96QV1 700 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 TCF12Q99081 682 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 GAS2L1Q99501 681 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 OSMRQ99650 979 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 ZKSCAN3Q9BRR0 538 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 KANSL2Q9H9L4 492 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 ST7Q9NRC1 585 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 SIRPGQ9P1W8 387 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 SALL4Q9UJQ4 1053 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 STRIP2Q9ULQ0 834 aa2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 SUPT16HQ9Y5B9 1047 aaKnown RBP2.71□□□□□ -1.98
SNORA48.1-201ENST00000390879 DCDC2BA2VCK2 349 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 TTLL8A6PVC2 850 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 POTECB2RU33 542 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 KHNYNO15037 678 aaKnown RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 KLF4O43474 513 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 PAGE1O75459 146 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 RGS20O76081 388 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 TRIM37O94972 964 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 EGFRP00533 1210 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 RLBP1P12271 317 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 TFE3P19532 575 aaPredicted RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 NFKB1P19838 968 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 LMNB1P20700 586 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 GARTP22102 1010 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 GRIA4P48058 902 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SOX9P48436 509 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 ZNF157P51786 506 aaPredicted RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SFSWAPQ12872 951 aaKnown RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 CCINQ13939 588 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SEPT6Q14141 434 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 RASA3Q14644 834 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 GRIN2CQ14957 1233 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SPRED3Q2MJR0 410 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 PCNX4Q63HM2 1172 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 TTBK2Q6IQ55 1244 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 BNC2Q6ZN30 1099 aaPredicted RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 NOL8Q76FK4 1167 aaKnown RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SV2BQ7L1I2 683 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 RAB44Q7Z6P3 723 aaPredicted RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 CELF2-AS1Q8N7Q2 184 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 OR13H1Q8NG92 308 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 ASAP3Q8TDY4 903 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SH3TC2Q8TF17 1288 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 JARID2Q92833 1246 aaPredicted RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 KCNB2Q92953 911 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 CNTNAP3BQ96NU0 1288 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 PNMA5Q96PV4 448 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 FERD3LQ96RJ6 166 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 NT5C1AQ9BXI3 368 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 SRRTQ9BXP5 876 aaKnown RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 CNTNAP3Q9BZ76 1288 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 FANCLQ9NW38 375 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 IFT57Q9NWB7 429 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 ZFATQ9P243 1243 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 KLHL42Q9P2K6 505 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 PRKAG3Q9UGI9 489 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 GPN3Q9UHW5 284 aaPredicted RBP2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 PPM1HQ9ULR3 514 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 KCNH4Q9UQ05 1017 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 COL4A3BPQ9Y5P4 624 aa2.7□□□□□ -1.98
SNORA48.1-201ENST00000390879 KRTAP4-8A0A0G2JLE6 195 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 ENPP3O14638 875 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 GDF9O60383 454 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 GREM1O60565 184 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 CDC45O75419 566 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 F13A1P00488 732 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 PSAPP07602 524 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 BMP1P13497 986 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 EIF6P56537 245 aaKnown RBP2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 MLLT1Q03111 559 aaPredicted RBP2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 LMNB2Q03252 620 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 HYAL2Q12891 473 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 WDR44Q5JSH3 913 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 LARP1BQ659C4 914 aaKnown RBP2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 MRPL14Q6P1L8 145 aaKnown RBP2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 RIPOR1Q6ZS17 1223 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 CCNJLQ8IV13 435 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 FAM169BQ8N8A8 192 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 ZCRB1Q8TBF4 217 aaKnown RBP2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 MKL1Q969V6 931 aa2.69□□□□□ -1.98
SNORA48.1-201ENST00000390879 PLD4Q96BZ4 506 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms