RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
TRAV40-201ENST00000390467 SH2B1Q9NRF2 756 aaPredicted RBP6.82□□□□□ -1.32
TRAV40-201ENST00000390467 FOXD3Q9UJU5 478 aaPredicted RBP6.82□□□□□ -1.32
TRAV40-201ENST00000390467 PPME1Q9Y570 386 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 EREGO14944 169 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 PCSK2P16519 638 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 CDC27P30260 824 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 AAMPQ13685 434 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 ECM1Q16610 540 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 GJD3Q8N144 294 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 CARD10Q9BWT7 1032 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 SRA1Q9HD15 236 aaKnown RBP6.81□□□□□ -1.32
TRAV40-201ENST00000390467 DZANK1Q9NVP4 752 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 KCNK4Q9NYG8 393 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 MTMR7Q9Y216 660 aa6.81□□□□□ -1.32
TRAV40-201ENST00000390467 F8W735 103 aaPredicted RBP6.8□□□□□ -1.32
TRAV40-201ENST00000390467 TNFRSF21O75509 655 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 PRSS36Q5K4E3 855 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 XP32Q5T750 250 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 MAP4K3Q8IVH8 894 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 AGGF1Q8N302 714 aaeCLIP6.8□□□□□ -1.32
TRAV40-201ENST00000390467 ADAM19Q9H013 955 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
TRAV40-201ENST00000390467 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
TRAV40-201ENST00000390467 H3BRB1 525 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 ICMTO60725 284 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 PTPRAP18433 802 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 Q6ZS46 218 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.79□□□□□ -1.32
TRAV40-201ENST00000390467 CACTIN-AS1Q8N1I8 211 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 Q8N3U1 123 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 SNX29Q8TEQ0 813 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 MUC3BQ9H195 1237 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
TRAV40-201ENST00000390467 EGFL7Q9UHF1 273 aa6.79□□□□□ -1.32
TRAV40-201ENST00000390467 PDE2AO00408 941 aaPredicted RBP6.78□□□□□ -1.32
TRAV40-201ENST00000390467 FSCN2O14926 492 aa6.78□□□□□ -1.32
TRAV40-201ENST00000390467 ADAM11O75078 769 aa6.78□□□□□ -1.32
TRAV40-201ENST00000390467 PHACTR2O75167 634 aa6.78□□□□□ -1.32
TRAV40-201ENST00000390467 TTC16Q8NEE8 873 aa6.78□□□□□ -1.32
TRAV40-201ENST00000390467 FOXD4L4Q8WXT5 416 aaPredicted RBP6.78□□□□□ -1.32
TRAV40-201ENST00000390467 ZKSCAN3Q9BRR0 538 aa6.78□□□□□ -1.32
TRAV40-201ENST00000390467 LATS2Q9NRM7 1088 aa6.78□□□□□ -1.32
TRAV40-201ENST00000390467 ARHGAP4P98171 946 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 ZMYM1Q5SVZ6 1142 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 HGSNATQ68CP4 663 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 B4GALNT3Q6L9W6 998 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
TRAV40-201ENST00000390467 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
TRAV40-201ENST00000390467 H3BRJ5 948 aa6.76□□□□□ -1.33
TRAV40-201ENST00000390467 DDX3YO15523 660 aaKnown RBP6.76□□□□□ -1.33
TRAV40-201ENST00000390467 CD68P34810 354 aaPredicted RBP6.76□□□□□ -1.33
TRAV40-201ENST00000390467 USP5P45974 858 aa6.76□□□□□ -1.33
TRAV40-201ENST00000390467 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
TRAV40-201ENST00000390467 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
TRAV40-201ENST00000390467 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
TRAV40-201ENST00000390467 KLHDC7BQ96G42 594 aa6.76□□□□□ -1.33
TRAV40-201ENST00000390467 OSMRQ99650 979 aa6.76□□□□□ -1.33
TRAV40-201ENST00000390467 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
TRAV40-201ENST00000390467 GLB1P16278 677 aa6.75□□□□□ -1.33
TRAV40-201ENST00000390467 EHHADHQ08426 723 aa6.75□□□□□ -1.33
TRAV40-201ENST00000390467 TXNDC2Q86VQ3 553 aa6.75□□□□□ -1.33
TRAV40-201ENST00000390467 TMEM102Q8N9M5 508 aaPredicted RBP6.75□□□□□ -1.33
TRAV40-201ENST00000390467 NXPE3Q969Y0 559 aa6.75□□□□□ -1.33
TRAV40-201ENST00000390467 PRR23CQ6ZRP0 262 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 ERICH6Q7L0X2 663 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 KLHL23Q8NBE8 558 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 PMEPA1Q969W9 287 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 UBL7Q96S82 380 aaPredicted RBP6.74□□□□□ -1.33
TRAV40-201ENST00000390467 ZFYVE28Q9HCC9 887 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 SEC31BQ9NQW1 1179 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 AMOTL2Q9Y2J4 779 aa6.74□□□□□ -1.33
TRAV40-201ENST00000390467 METTL12A8MUP2 240 aa6.73□□□□□ -1.33
TRAV40-201ENST00000390467 EDN3P14138 238 aa6.73□□□□□ -1.33
TRAV40-201ENST00000390467 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
TRAV40-201ENST00000390467 USPL1Q5W0Q7 1092 aa6.73□□□□□ -1.33
TRAV40-201ENST00000390467 FAM117BQ6P1L5 589 aa6.73□□□□□ -1.33
TRAV40-201ENST00000390467 VN1R5Q7Z5H4 357 aa6.73□□□□□ -1.33
TRAV40-201ENST00000390467 BHLHE41Q9C0J9 482 aaPredicted RBP6.73□□□□□ -1.33
TRAV40-201ENST00000390467 CABP4P57796 275 aa6.72□□□□□ -1.33
TRAV40-201ENST00000390467 NLRP12P59046 1061 aa6.72□□□□□ -1.33
TRAV40-201ENST00000390467 DUOXA2Q1HG44 320 aa6.72□□□□□ -1.33
TRAV40-201ENST00000390467 SLC7A3Q8WY07 619 aa6.72□□□□□ -1.33
TRAV40-201ENST00000390467 FAM177BA6PVY3 158 aa6.71□□□□□ -1.34
TRAV40-201ENST00000390467 ARMC10Q8N2F6 343 aa6.71□□□□□ -1.34
TRAV40-201ENST00000390467 BSNDQ8WZ55 320 aa6.71□□□□□ -1.34
TRAV40-201ENST00000390467 WNT8BQ93098 351 aa6.71□□□□□ -1.34
TRAV40-201ENST00000390467 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
TRAV40-201ENST00000390467 BRPF3Q9ULD4 1205 aa6.71□□□□□ -1.34
TRAV40-201ENST00000390467 A0A1W2PP55 124 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 GPR182O15218 404 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 IGHA2P01877 340 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 ORC1Q13415 861 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms