RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PCDH11YQ9BZA8 1340 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 LAMA4Q16363 1823 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 CTDNEP1O95476 244 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 A1BGP04217 495 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 FOSBP53539 338 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 ZNF274Q96GC6 653 aaPredicted RBP19.17■□□□□ 0.66
VPS16-203ENST00000380469 ZNF594Q96JF6 807 aaPredicted RBP19.17■□□□□ 0.66
VPS16-203ENST00000380469 ZBTB3Q9H5J0 574 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 CPDO75976 1380 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 DCCP43146 1447 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 ADD1P35611 737 aaKnown RBP19.16■□□□□ 0.66
VPS16-203ENST00000380469 PLA2G4DQ86XP0 818 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 CCAR1Q8IX12 1150 aaKnown RBP19.16■□□□□ 0.66
VPS16-203ENST00000380469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.16■□□□□ 0.66
VPS16-203ENST00000380469 CEP126Q9P2H0 1117 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 MAST3O60307 1309 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 GLI3P10071 1580 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 SPATA31A3Q5VYP0 1347 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 CCDC186Q7Z3E2 898 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 CADPS2Q86UW7 1296 aa19.16■□□□□ 0.66
VPS16-203ENST00000380469 PARP4Q9UKK3 1724 aaKnown RBP19.15■□□□□ 0.66
VPS16-203ENST00000380469 CCDC73Q6ZRK6 1079 aa19.15■□□□□ 0.66
VPS16-203ENST00000380469 GOLGA6L19H0YKK7 550 aa19.14■□□□□ 0.66
VPS16-203ENST00000380469 PDIA3P30101 505 aaKnown RBP19.14■□□□□ 0.66
VPS16-203ENST00000380469 CCDC158Q5M9N0 1113 aa19.14■□□□□ 0.66
VPS16-203ENST00000380469 GORABQ5T7V8 394 aa19.14■□□□□ 0.66
VPS16-203ENST00000380469 NCOA5Q9HCD5 579 aaKnown RBP19.14■□□□□ 0.66
VPS16-203ENST00000380469 CTNNA3Q9UI47 895 aa19.14■□□□□ 0.66
VPS16-203ENST00000380469 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
VPS16-203ENST00000380469 CCDC57Q2TAC2 916 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 TOM1L2Q6ZVM7 507 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 AKAP2Q9Y2D5 859 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 M0R2C6 588 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 STX1AQ16623 288 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 TTC39AQ5SRH9 613 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 CHST3Q7LGC8 479 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 PUS3Q9BZE2 481 aaKnown RBP19.13■□□□□ 0.65
VPS16-203ENST00000380469 NUP188Q5SRE5 1749 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 SPEF2Q9C093 1822 aa19.13■□□□□ 0.65
VPS16-203ENST00000380469 SALL1Q9NSC2 1324 aa19.12■□□□□ 0.65
VPS16-203ENST00000380469 A0A0G2JLW4 131 aa19.12■□□□□ 0.65
VPS16-203ENST00000380469 KINO60870 393 aaKnown RBP19.12■□□□□ 0.65
VPS16-203ENST00000380469 USP28Q96RU2 1077 aa19.12■□□□□ 0.65
VPS16-203ENST00000380469 ZFYP08048 801 aaPredicted RBP19.12■□□□□ 0.65
VPS16-203ENST00000380469 CLIP2Q9UDT6 1046 aa19.12■□□□□ 0.65
VPS16-203ENST00000380469 TJP1Q07157 1748 aa19.12■□□□□ 0.65
VPS16-203ENST00000380469 MYH15Q9Y2K3 1946 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 CDC25BP30305 580 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 ME1P48163 572 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 IMMTQ16891 758 aaKnown RBP19.11■□□□□ 0.65
VPS16-203ENST00000380469 FBXL16Q8N461 479 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 OSBP2Q969R2 916 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.65
VPS16-203ENST00000380469 NRBP1Q9UHY1 535 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 GUCY1B3Q02153 619 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 FAM160A1Q05DH4 1040 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 WASHC4Q2M389 1173 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 GOLPH3LQ9H4A5 285 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 FBXO3Q9UK99 471 aa19.11■□□□□ 0.65
VPS16-203ENST00000380469 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
VPS16-203ENST00000380469 CARMIL3Q8ND23 1372 aa19.1■□□□□ 0.65
VPS16-203ENST00000380469 SNW1Q13573 536 aaKnown RBP19.09■□□□□ 0.65
VPS16-203ENST00000380469 IQCB1Q15051 598 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 NKX1-1Q15270 411 aaPredicted RBP19.09■□□□□ 0.65
VPS16-203ENST00000380469 XAGE2Q96GT9 111 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 DHX16O60231 1041 aaKnown RBP19.09■□□□□ 0.65
VPS16-203ENST00000380469 EVCP57679 992 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 TCIRG1Q13488 830 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 SARM1Q6SZW1 724 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 FSIP1Q8NA03 581 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 ISCA1Q9BUE6 129 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 ANO10Q9NW15 660 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 UBR2Q8IWV8 1755 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 KCPQ6ZWJ8 1503 aa19.09■□□□□ 0.65
VPS16-203ENST00000380469 BECN2A8MW95 431 aa19.08■□□□□ 0.65
VPS16-203ENST00000380469 PPFIA3O75145 1194 aa19.08■□□□□ 0.65
VPS16-203ENST00000380469 LRMPQ12912 555 aa19.08■□□□□ 0.65
VPS16-203ENST00000380469 TAF7LQ5H9L4 462 aa19.08■□□□□ 0.65
VPS16-203ENST00000380469 TSC1Q92574 1164 aa19.08■□□□□ 0.65
VPS16-203ENST00000380469 C11orf57Q6ZUT1 292 aaPredicted RBP19.08■□□□□ 0.64
VPS16-203ENST00000380469 ENGASEQ8NFI3 743 aa19.08■□□□□ 0.64
VPS16-203ENST00000380469 RIOK3O14730 519 aaKnown RBP19.07■□□□□ 0.64
VPS16-203ENST00000380469 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
VPS16-203ENST00000380469 FDPSP14324 419 aaKnown RBP19.07■□□□□ 0.64
VPS16-203ENST00000380469 IL2RBP14784 551 aa19.07■□□□□ 0.64
VPS16-203ENST00000380469 ADORA1P30542 326 aa19.07■□□□□ 0.64
VPS16-203ENST00000380469 ILDR1Q86SU0 546 aaPredicted RBP19.07■□□□□ 0.64
VPS16-203ENST00000380469 MRFAP1L1Q96HT8 127 aa19.07■□□□□ 0.64
VPS16-203ENST00000380469 FGAP02671 866 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 HAND2P61296 217 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 MRPS27Q92552 414 aaKnown RBP19.06■□□□□ 0.64
VPS16-203ENST00000380469 NAT10Q9H0A0 1025 aaKnown RBP19.06■□□□□ 0.64
VPS16-203ENST00000380469 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
VPS16-203ENST00000380469 PRC1O43663 620 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 SF3A1Q15459 793 aaKnown RBP19.06■□□□□ 0.64
VPS16-203ENST00000380469 ADALQ6DHV7 355 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 ZNF710Q8N1W2 664 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms