RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 HSP90AB4PQ58FF6 505 aa14.76□□□□□ -0.05
PCNA-201ENST00000379143 DCAF8Q5TAQ9 597 aa14.76□□□□□ -0.05
PCNA-201ENST00000379143 C15orf52Q6ZUT6 534 aaKnown RBP14.76□□□□□ -0.05
PCNA-201ENST00000379143 VGLL2Q8N8G2 317 aa14.76□□□□□ -0.05
PCNA-201ENST00000379143 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
PCNA-201ENST00000379143 RIMBP2O15034 1052 aa14.75□□□□□ -0.05
PCNA-201ENST00000379143 OS9Q13438 667 aaPredicted RBP14.75□□□□□ -0.05
PCNA-201ENST00000379143 PUM3Q15397 648 aaKnown RBP14.75□□□□□ -0.05
PCNA-201ENST00000379143 ZNRF3Q9ULT6 936 aa14.75□□□□□ -0.05
PCNA-201ENST00000379143 FZD9O00144 591 aa14.74□□□□□ -0.05
PCNA-201ENST00000379143 EIF6P56537 245 aaKnown RBP14.74□□□□□ -0.05
PCNA-201ENST00000379143 DPY19L2Q6NUT2 758 aa14.74□□□□□ -0.05
PCNA-201ENST00000379143 ERC1Q8IUD2 1116 aa14.74□□□□□ -0.05
PCNA-201ENST00000379143 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
PCNA-201ENST00000379143 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
PCNA-201ENST00000379143 AKAP2Q9Y2D5 859 aa14.74□□□□□ -0.05
PCNA-201ENST00000379143 IFIT1P09914 478 aaKnown RBP14.73□□□□□ -0.05
PCNA-201ENST00000379143 PODNQ7Z5L7 613 aa14.73□□□□□ -0.05
PCNA-201ENST00000379143 LPIN2Q92539 896 aa14.73□□□□□ -0.05
PCNA-201ENST00000379143 GPR101Q96P66 508 aaPredicted RBP14.73□□□□□ -0.05
PCNA-201ENST00000379143 COA1Q9GZY4 146 aa14.73□□□□□ -0.05
PCNA-201ENST00000379143 WTIPA6NIX2 430 aaPredicted RBP14.72□□□□□ -0.05
PCNA-201ENST00000379143 ECE2O60344 883 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 SLC5A1P13866 664 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 FGFR2P21802 821 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 COL4A5P29400 1685 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 CAVIN4Q5BKX8 364 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 ZNF804AQ7Z570 1209 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 EXOC6Q8TAG9 804 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 NMRK2Q9NPI5 230 aa14.72□□□□□ -0.05
PCNA-201ENST00000379143 KDM2BQ8NHM5 1336 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 IRS2Q9Y4H2 1338 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 SNAP23O00161 211 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 RAB11FIP3O75154 756 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 SASH1O94885 1247 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 TFCP2Q12800 502 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 GPR108Q9NPR9 543 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 EXOC6BQ9Y2D4 811 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 PCDHB15Q9Y5E8 787 aa14.71□□□□□ -0.05
PCNA-201ENST00000379143 GLTPD2A6NH11 291 aa14.7□□□□□ -0.06
PCNA-201ENST00000379143 TNIP1Q15025 636 aa14.7□□□□□ -0.06
PCNA-201ENST00000379143 TXNRD3Q86VQ6 643 aa14.7□□□□□ -0.06
PCNA-201ENST00000379143 VPS37DQ86XT2 251 aa14.7□□□□□ -0.06
PCNA-201ENST00000379143 KLRK1P26718 216 aa14.69□□□□□ -0.06
PCNA-201ENST00000379143 HIBADHP31937 336 aaKnown RBP14.69□□□□□ -0.06
PCNA-201ENST00000379143 IRX6P78412 446 aaPredicted RBP14.69□□□□□ -0.06
PCNA-201ENST00000379143 CIAPIN1Q6FI81 312 aa14.69□□□□□ -0.06
PCNA-201ENST00000379143 GPC2Q8N158 579 aa14.69□□□□□ -0.06
PCNA-201ENST00000379143 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
PCNA-201ENST00000379143 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
PCNA-201ENST00000379143 CD209Q9NNX6 404 aa14.69□□□□□ -0.06
PCNA-201ENST00000379143 ARAP2Q8WZ64 1704 aa14.69□□□□□ -0.06
PCNA-201ENST00000379143 A0A1B0GUL7 405 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 YDJCA8MPS7 323 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 IL1R1P14778 569 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 HTRA3P83110 453 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 CXCL9Q07325 125 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 HDAC1Q13547 482 aaPredicted RBP14.68□□□□□ -0.06
PCNA-201ENST00000379143 KLRG1Q96E93 195 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 FAM84BQ96KN1 310 aaPredicted RBP14.68□□□□□ -0.06
PCNA-201ENST00000379143 DCTPP1Q9H773 170 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 ZNF609O15014 1411 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
PCNA-201ENST00000379143 USP17L3A6NCW0 530 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 USP17L4A6NCW7 530 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 NEFLP07196 543 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 GYG1P46976 350 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 TIMM10P62072 90 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 COL13A1Q5TAT6 717 aaPredicted RBP14.67□□□□□ -0.06
PCNA-201ENST00000379143 USP17L1Q7RTZ2 530 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 JMYQ8N9B5 988 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 NEUROD6Q96NK8 337 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 RWDD1Q9H446 243 aaPredicted RBP14.67□□□□□ -0.06
PCNA-201ENST00000379143 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 PSME4Q14997 1843 aa14.67□□□□□ -0.06
PCNA-201ENST00000379143 RAD17O75943 681 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 STRIP1Q5VSL9 837 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 GNL3LQ9NVN8 582 aaKnown RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 GJA3Q9Y6H8 435 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 ZBTB22O15209 634 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 FRAT2O75474 233 aaPredicted RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 VIL1P09327 827 aaKnown RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 RPS12P25398 132 aaKnown RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 BCAMP50895 628 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 GORABQ5T7V8 394 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 TTLL5Q6EMB2 1281 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 TDRD7Q8NHU6 1098 aaKnown RBP14.66□□□□□ -0.06
PCNA-201ENST00000379143 GCC1Q96CN9 775 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 XAGE2Q96GT9 111 aa14.66□□□□□ -0.06
PCNA-201ENST00000379143 L3MBTL3Q96JM7 780 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms