RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TTC16Q8NEE8 873 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
RAD50-201ENST00000378823 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 DACT1Q9NYF0 836 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 Q6ZUG5 572 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 SAMD15Q9P1V8 674 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
RAD50-201ENST00000378823 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 KIAA1524Q8TCG1 905 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 MTRF1LQ9UGC7 380 aaKnown RBP12.68□□□□□ -0.38
RAD50-201ENST00000378823 PLCB3Q01970 1234 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 CAPZA3Q96KX2 299 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 RAPGEF3O95398 923 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 HDXQ7Z353 690 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
RAD50-201ENST00000378823 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
RAD50-201ENST00000378823 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
RAD50-201ENST00000378823 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
RAD50-201ENST00000378823 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 SETDB1Q15047 1291 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 PPP1R7Q15435 360 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 CCDC110Q8TBZ0 833 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 BRF1Q92994 677 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 ALDH3A1P30838 453 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 SNX16P57768 344 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 NME9Q86XW9 330 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 FAM76AQ8TAV0 307 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 ATP6V0A2Q9Y487 856 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 SPTLC2O15270 562 aa12.67□□□□□ -0.38
RAD50-201ENST00000378823 RSRC1Q96IZ7 334 aaKnown RBP12.67□□□□□ -0.38
RAD50-201ENST00000378823 MAK16Q9BXY0 300 aaKnown RBP12.67□□□□□ -0.38
RAD50-201ENST00000378823 GAS8O95995 478 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 B4GALNT4Q76KP1 1039 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
RAD50-201ENST00000378823 NAPAP54920 295 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
RAD50-201ENST00000378823 GMNNO75496 209 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 ATP5DP30049 168 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 TRIM75PA6NK02 468 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
RAD50-201ENST00000378823 TPD52P55327 224 aaPredicted RBP12.66□□□□□ -0.38
RAD50-201ENST00000378823 ST5P78524 1137 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 LZTFL1Q9NQ48 299 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 KRT2P35908 639 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 ATP11AP98196 1134 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 F13A1P00488 732 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 CEP128Q6ZU80 1094 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 STMN2Q93045 179 aa12.66□□□□□ -0.38
RAD50-201ENST00000378823 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
RAD50-201ENST00000378823 ABCC5O15440 1437 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 IGHDP01880 384 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
RAD50-201ENST00000378823 GOLGA4Q13439 2230 aaKnown RBP12.65□□□□□ -0.38
RAD50-201ENST00000378823 DNAJC21Q5F1R6 531 aaKnown RBP12.65□□□□□ -0.38
RAD50-201ENST00000378823 MTUS1Q9ULD2 1270 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 CNGA4Q8IV77 575 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 SNX21Q969T3 373 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 CALM1P0DP23 149 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 CALM2P0DP24 149 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 CALM3P0DP25 149 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
RAD50-201ENST00000378823 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.38
RAD50-201ENST00000378823 DTHD1Q6ZMT9 781 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 SMIM23A6NLE4 172 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 GRM8O00222 908 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 EXOC5O00471 708 aa12.65□□□□□ -0.38
RAD50-201ENST00000378823 RFC4P35249 363 aa12.65□□□□□ -0.39
RAD50-201ENST00000378823 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.39
RAD50-201ENST00000378823 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.39
RAD50-201ENST00000378823 UBLCP1Q8WVY7 318 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms