RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 PUM3Q15397 648 aaKnown RBP14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 SBF1O95248 1867 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 ZNF541Q9H0D2 1346 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 YDJCA8MPS7 323 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 UBE4AQ14139 1066 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 ZNRF3Q9ULT6 936 aa14.5□□□□□ -0.09
DEPDC4-202ENST00000378244 ATP2B3Q16720 1220 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 DPY19L2Q6NUT2 758 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 VPS37DQ86XT2 251 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 JAG2Q9Y219 1238 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 MED23Q9ULK4 1368 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 FZD9O00144 591 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 EIF6P56537 245 aaKnown RBP14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 CXCL9Q07325 125 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 VPS33BQ9H267 617 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 IL1RAPL2Q9NP60 686 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 LTBP1Q14766 1721 aa14.49□□□□□ -0.09
DEPDC4-202ENST00000378244 IFIT1P09914 478 aaKnown RBP14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 BCAMP50895 628 aa14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 LPIN2Q92539 896 aa14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 CHD4Q14839 1912 aa14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 A0A1B0GUL7 405 aa14.48□□□□□ -0.09
DEPDC4-202ENST00000378244 SLC5A1P13866 664 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 FGFR2P21802 821 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 ADORA1P30542 326 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 HIBADHP31937 336 aaKnown RBP14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 CAVIN4Q5BKX8 364 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 ZNF804AQ7Z570 1209 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 CD209Q9NNX6 404 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 FRAT2O75474 233 aaPredicted RBP14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 COA1Q9GZY4 146 aa14.47□□□□□ -0.09
DEPDC4-202ENST00000378244 IRS2Q9Y4H2 1338 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 GLTPD2A6NH11 291 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 CIAPIN1Q6FI81 312 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 PODNQ7Z5L7 613 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 AKAP2Q9Y2D5 859 aa14.46□□□□□ -0.09
DEPDC4-202ENST00000378244 PSMD14O00487 310 aa14.46□□□□□ -0.1
DEPDC4-202ENST00000378244 GTF2IP78347 998 aa14.46□□□□□ -0.1
DEPDC4-202ENST00000378244 CCDC8Q9H0W5 538 aaPredicted RBP14.46□□□□□ -0.1
DEPDC4-202ENST00000378244 SMARCA5O60264 1052 aaPredicted RBP14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 HSP90AB4PQ58FF6 505 aa14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 TNNI3KQ59H18 835 aa14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 GORABQ5T7V8 394 aa14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 ZNF784Q8NCA9 323 aaPredicted RBP14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 XAGE2Q96GT9 111 aa14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 NMRK2Q9NPI5 230 aa14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 FPGT-TNNI3KV9GXZ4 949 aa14.45□□□□□ -0.1
DEPDC4-202ENST00000378244 TTLL5Q6EMB2 1281 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 PHKA1P46020 1223 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 C15orf52Q6ZUT6 534 aaKnown RBP14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 ERC1Q8IUD2 1116 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 GPC2Q8N158 579 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 RRAGCQ9HB90 399 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 TLR7Q9NYK1 1049 aaKnown RBP14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 ZC3H4Q9UPT8 1303 aaKnown RBP14.44□□□□□ -0.1
DEPDC4-202ENST00000378244 TIAM2Q8IVF5 1701 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 IGHDP01880 384 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 NEFLP07196 543 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 CHAF1AQ13111 956 aaPredicted RBP14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 AACSQ86V21 672 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 KIF1BPQ96EK5 621 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 DBNDD2Q9BQY9 259 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 USP17L3A6NCW0 530 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 USP17L4A6NCW7 530 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 TNIP1Q15025 636 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 CCDC102BQ68D86 513 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 USP17L1Q7RTZ2 530 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 A0A1B0GUL6 1792 aa14.43□□□□□ -0.1
DEPDC4-202ENST00000378244 GMPSP49915 693 aaPredicted RBP14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 AAMPQ13685 434 aa14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 B4GALNT3Q6L9W6 998 aa14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 CLASRPQ8N2M8 674 aaKnown RBP14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 LRRCC1Q9C099 1032 aa14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 SHTN1A0MZ66 631 aa14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 IL1R1P14778 569 aa14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 TDRD7Q8NHU6 1098 aaKnown RBP14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 DBNLQ9UJU6 430 aaKnown RBP14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
DEPDC4-202ENST00000378244 F8W031 263 aaPredicted RBP14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 RAB11FIP3O75154 756 aa14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 RWDD1Q9H446 243 aaPredicted RBP14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 EPS15P42566 896 aa14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 SCNN1DP51172 638 aa14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 HDAC1Q13547 482 aaPredicted RBP14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 ZNF609O15014 1411 aa14.41□□□□□ -0.1
DEPDC4-202ENST00000378244 SCN9AQ15858 1988 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms