RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 KCNF1Q9H3M0 494 aa21.39■■□□□ 1.01
TDP2-202ENST00000378198 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.01
TDP2-202ENST00000378198 RCOR1Q9UKL0 485 aa21.39■■□□□ 1.01
TDP2-202ENST00000378198 PTPDC1A2A3K4 754 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 CTDNEP1O95476 244 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 SLFNL1Q499Z3 407 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 TOM1L2Q6ZVM7 507 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 TDRD7Q8NHU6 1098 aaKnown RBP21.38■■□□□ 1.01
TDP2-202ENST00000378198 ZNF594Q96JF6 807 aaPredicted RBP21.38■■□□□ 1.01
TDP2-202ENST00000378198 FBXO3Q9UK99 471 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 SHANK3Q9BYB0 1731 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 ADD1P35611 737 aaKnown RBP21.38■■□□□ 1.01
TDP2-202ENST00000378198 CEP126Q9P2H0 1117 aa21.38■■□□□ 1.01
TDP2-202ENST00000378198 CTAGE5O15320 804 aa21.37■■□□□ 1.01
TDP2-202ENST00000378198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.37■■□□□ 1.01
TDP2-202ENST00000378198 FBXL16Q8N461 479 aa21.37■■□□□ 1.01
TDP2-202ENST00000378198 MYH7P12883 1935 aa21.37■■□□□ 1.01
TDP2-202ENST00000378198 C17orf53Q8N3J3 647 aaPredicted RBP21.36■■□□□ 1.01
TDP2-202ENST00000378198 ZNF396Q96N95 335 aaPredicted RBP21.36■■□□□ 1.01
TDP2-202ENST00000378198 SALL1Q9NSC2 1324 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 NWD2Q9ULI1 1742 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 TNS2Q63HR2 1409 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 ZNF165P49910 485 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 CCDC158Q5M9N0 1113 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 ISCA1Q9BUE6 129 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 AKAP2Q9Y2D5 859 aa21.36■■□□□ 1.01
TDP2-202ENST00000378198 PDIA3P30101 505 aaKnown RBP21.35■■□□□ 1.01
TDP2-202ENST00000378198 CCT2P78371 535 aaKnown RBP21.35■■□□□ 1.01
TDP2-202ENST00000378198 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
TDP2-202ENST00000378198 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
TDP2-202ENST00000378198 CTNNA3Q9UI47 895 aa21.35■■□□□ 1.01
TDP2-202ENST00000378198 M0R2C6 588 aa21.35■■□□□ 1.01
TDP2-202ENST00000378198 ZFYP08048 801 aaPredicted RBP21.35■■□□□ 1.01
TDP2-202ENST00000378198 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.013e-9■■■■■ 38.5
TDP2-202ENST00000378198 CCDC57Q2TAC2 916 aa21.35■■□□□ 1.01
TDP2-202ENST00000378198 PYCARDQ9ULZ3 195 aa21.35■■□□□ 1.01
TDP2-202ENST00000378198 TCIRG1Q13488 830 aa21.34■■□□□ 1.01
TDP2-202ENST00000378198 PLA2G4DQ86XP0 818 aa21.34■■□□□ 1.01
TDP2-202ENST00000378198 XIRP1Q702N8 1843 aaKnown RBP21.34■■□□□ 1.01
TDP2-202ENST00000378198 COL5A2P05997 1499 aaPredicted RBP21.34■■□□□ 1.01
TDP2-202ENST00000378198 IL2RBP14784 551 aa21.33■■□□□ 1.01
TDP2-202ENST00000378198 ZNF75DP51815 510 aa21.33■■□□□ 1.01
TDP2-202ENST00000378198 EVCP57679 992 aa21.33■■□□□ 1.01
TDP2-202ENST00000378198 TTC39AQ5SRH9 613 aa21.33■■□□□ 1.01
TDP2-202ENST00000378198 CCAR1Q8IX12 1150 aaKnown RBP21.33■■□□□ 1.01
TDP2-202ENST00000378198 TRIM5Q9C035 493 aa21.33■■□□□ 1.01
TDP2-202ENST00000378198 DNAJC25Q9H1X3 360 aa21.33■■□□□ 1.01
TDP2-202ENST00000378198 A0A0G2JLW4 131 aa21.33■■□□□ 1
TDP2-202ENST00000378198 CEBPZQ03701 1054 aaKnown RBP21.33■■□□□ 1
TDP2-202ENST00000378198 OSBP2Q969R2 916 aa21.33■■□□□ 1
TDP2-202ENST00000378198 PTGS1P23219 599 aa21.32■■□□□ 1
TDP2-202ENST00000378198 FKBP4Q02790 459 aaKnown RBP eCLIP21.32■■□□□ 1
TDP2-202ENST00000378198 GORABQ5T7V8 394 aa21.32■■□□□ 1
TDP2-202ENST00000378198 NCOA5Q9HCD5 579 aaKnown RBP21.32■■□□□ 1
TDP2-202ENST00000378198 DDX60Q8IY21 1712 aaKnown RBP21.32■■□□□ 1
TDP2-202ENST00000378198 TRIM28Q13263 835 aaKnown RBP21.32■■□□□ 1
TDP2-202ENST00000378198 CCDC73Q6ZRK6 1079 aa21.32■■□□□ 1
TDP2-202ENST00000378198 DRC7Q8IY82 874 aa21.32■■□□□ 1
TDP2-202ENST00000378198 USP28Q96RU2 1077 aa21.32■■□□□ 1
TDP2-202ENST00000378198 NAP1L2Q9ULW6 460 aaPredicted RBP21.32■■□□□ 1
TDP2-202ENST00000378198 ABCC12Q96J65 1359 aa21.32■■□□□ 1
TDP2-202ENST00000378198 FOSBP53539 338 aa21.31■■□□□ 1
TDP2-202ENST00000378198 IMMTQ16891 758 aaKnown RBP21.31■■□□□ 1
TDP2-202ENST00000378198 CARMIL3Q8ND23 1372 aa21.31■■□□□ 1
TDP2-202ENST00000378198 XAGE2Q96GT9 111 aa21.31■■□□□ 1
TDP2-202ENST00000378198 CARD10Q9BWT7 1032 aa21.31■■□□□ 1
TDP2-202ENST00000378198 PLA2G12BQ9BX93 195 aa21.31■■□□□ 1
TDP2-202ENST00000378198 TTLL5Q6EMB2 1281 aa21.3■■□□□ 1
TDP2-202ENST00000378198 CCDC186Q7Z3E2 898 aa21.3■■□□□ 1
TDP2-202ENST00000378198 TOGARAM1Q9Y4F4 1720 aa21.3■■□□□ 1
TDP2-202ENST00000378198 PCCAP05165 728 aaPredicted RBP21.3■■□□□ 1
TDP2-202ENST00000378198 CDC25BP30305 580 aa21.3■■□□□ 1
TDP2-202ENST00000378198 STX1AQ16623 288 aa21.3■■□□□ 1
TDP2-202ENST00000378198 CHST3Q7LGC8 479 aa21.3■■□□□ 1
TDP2-202ENST00000378198 CHAF1AQ13111 956 aaPredicted RBP21.29■■□□□ 1
TDP2-202ENST00000378198 WASHC4Q2M389 1173 aa21.29■■□□□ 1
TDP2-202ENST00000378198 BRINP3Q76B58 766 aa21.29■■□□□ 1
TDP2-202ENST00000378198 GOLGA6L19H0YKK7 550 aa21.28■■□□□ 1
TDP2-202ENST00000378198 FAM160A1Q05DH4 1040 aa21.28■■□□□ 1
TDP2-202ENST00000378198 SNW1Q13573 536 aaKnown RBP21.28■■□□□ 1
TDP2-202ENST00000378198 IQCB1Q15051 598 aa21.28■■□□□ 1
TDP2-202ENST00000378198 APPBP2Q92624 585 aa21.28■■□□□ 1
TDP2-202ENST00000378198 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
TDP2-202ENST00000378198 GOLPH3LQ9H4A5 285 aa21.28■■□□□ 1
TDP2-202ENST00000378198 ABCA3Q99758 1704 aa21.28■■□□□ 1
TDP2-202ENST00000378198 KINO60870 393 aaKnown RBP21.28■■□□□ 1
TDP2-202ENST00000378198 CSF1RP07333 972 aa21.28■■□□□ 1
TDP2-202ENST00000378198 ADORA1P30542 326 aa21.28■■□□□ 1
TDP2-202ENST00000378198 TAF7LQ5H9L4 462 aa21.28■■□□□ 1
TDP2-202ENST00000378198 SARM1Q6SZW1 724 aa21.28■■□□□ 1
TDP2-202ENST00000378198 ENGASEQ8NFI3 743 aa21.28■■□□□ 1
TDP2-202ENST00000378198 FTOQ9C0B1 505 aaKnown RBP eCLIP21.28■■□□□ 1
TDP2-202ENST00000378198 DHX16O60231 1041 aaKnown RBP21.27■■□□□ 1
TDP2-202ENST00000378198 FDPSP14324 419 aaKnown RBP21.27■■□□□ 1
TDP2-202ENST00000378198 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
TDP2-202ENST00000378198 ILDR1Q86SU0 546 aaPredicted RBP21.27■□□□□ 0.99
TDP2-202ENST00000378198 RTEL1Q9NZ71 1219 aa21.27■□□□□ 0.99
TDP2-202ENST00000378198 MYH3P11055 1940 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 AKAP11Q9UKA4 1901 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 FOXP2O15409 715 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms