RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 H3BQV1 296 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 CYP27B1O15528 508 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 ZBTB22O15209 634 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 MEGF6O75095 1541 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 SCRN1Q12765 414 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 RESTQ13127 1097 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 CABLES1Q8TDN4 633 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 DCAF5Q96JK2 942 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 NEUROD6Q96NK8 337 aa19.46■□□□□ 0.71
PCDHA1-201ENST00000378133 STOX1Q6ZVD7 989 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 CASP7P55210 303 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 CEBPZQ03701 1054 aaKnown RBP19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 CHRNA2Q15822 529 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 BRINP3Q76B58 766 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 LRRC8AQ8IWT6 810 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 KRT222Q8N1A0 295 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 KBTBD3Q8NAB2 608 aa19.45■□□□□ 0.7
PCDHA1-201ENST00000378133 FOSBP53539 338 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 TIMM10P62072 90 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 ZNF397Q8NF99 534 aaPredicted RBP19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 GOLIM4O00461 696 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 CDC25BP30305 580 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 CABP4P57796 275 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 TERF2Q15554 542 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 PTPN14Q15678 1187 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 PLBD2Q8NHP8 589 aa19.44■□□□□ 0.7
PCDHA1-201ENST00000378133 GOLGA6L19H0YKK7 550 aa19.43■□□□□ 0.7
PCDHA1-201ENST00000378133 KMT5BQ4FZB7 885 aa19.43■□□□□ 0.7
PCDHA1-201ENST00000378133 ZNF215Q9UL58 517 aaPredicted RBP19.43■□□□□ 0.7
PCDHA1-201ENST00000378133 AFDNP55196 1824 aaKnown RBP19.43■□□□□ 0.7
PCDHA1-201ENST00000378133 USP27XA6NNY8 438 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 CAVIN2O95810 425 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 FOXO4P98177 505 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 ZSCAN16Q9H4T2 348 aaPredicted RBP19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 V9GYY5 206 aaPredicted RBP19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 ARID5BQ14865 1188 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 DHX32Q7L7V1 743 aaKnown RBP19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 RFX7Q2KHR2 1363 aa19.42■□□□□ 0.7
PCDHA1-201ENST00000378133 A0A0G2JLW4 131 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 NEMFO60524 1076 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 APOBRQ0VD83 1088 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 PAG1Q9NWQ8 432 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 SKILP12757 684 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 CCT2P78371 535 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 ATG9AQ7Z3C6 839 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 SMARCC2Q8TAQ2 1214 aa19.41■□□□□ 0.7
PCDHA1-201ENST00000378133 PFKFB2O60825 505 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 NSUN7Q8NE18 718 aaKnown RBP19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 SH3TC1Q8TE82 1336 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 TNS3Q68CZ2 1445 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 H7C1W4 665 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 FTOQ9C0B1 505 aaKnown RBP eCLIP19.4■□□□□ 0.7
PCDHA1-201ENST00000378133 CTDNEP1O95476 244 aa19.39■□□□□ 0.7
PCDHA1-201ENST00000378133 HMGB1P09429 215 aaKnown RBP19.39■□□□□ 0.7
PCDHA1-201ENST00000378133 TTLL7Q6ZT98 887 aa19.39■□□□□ 0.7
PCDHA1-201ENST00000378133 NYAP1Q6ZVC0 841 aa19.39■□□□□ 0.7
PCDHA1-201ENST00000378133 ADD1P35611 737 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-201ENST00000378133 IQCB1Q15051 598 aa19.39■□□□□ 0.69
PCDHA1-201ENST00000378133 SARM1Q6SZW1 724 aa19.39■□□□□ 0.69
PCDHA1-201ENST00000378133 MRFAP1L1Q96HT8 127 aa19.39■□□□□ 0.69
PCDHA1-201ENST00000378133 LLPHQ9BRT6 129 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-201ENST00000378133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 CCDC66A2RUB6 948 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 ZNF594Q96JF6 807 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 NCOA5Q9HCD5 579 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 HELLSQ9NRZ9 838 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 TRMT1Q9NXH9 659 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 LRRC24Q50LG9 513 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 ERO1AQ96HE7 468 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 ARFGEF2Q9Y6D5 1785 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 PTPDC1A2A3K4 754 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 HSPD1P10809 573 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 EXOSC10Q01780 885 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 FBXO38Q6PIJ6 1188 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 FILIP1Q7Z7B0 1213 aa19.38■□□□□ 0.69
PCDHA1-201ENST00000378133 ELF2Q15723 593 aa19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 DSCC1Q9BVC3 393 aa19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 CCDC69A6NI79 296 aa19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 E7EWF7 191 aa19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 ZMYM1Q5SVZ6 1142 aa19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 C11orf57Q6ZUT1 292 aaPredicted RBP19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
PCDHA1-201ENST00000378133 PALLDQ8WX93 1383 aa19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 BECN2A8MW95 431 aa19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 GUCY1B3Q02153 619 aa19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 CCAR1Q8IX12 1150 aaKnown RBP19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 A1BGP04217 495 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms