RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 C8orf34Q49A92 452 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 USP21Q9UK80 565 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 TTC6Q86TZ1 520 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 DDX17Q92841 729 aaKnown RBP22.63■■□□□ 1.21
PCDH8-202ENST00000377942 TCEANC2Q96MN5 208 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 GDPD2Q9HCC8 539 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.21
PCDH8-202ENST00000377942 CETN1Q12798 172 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 ESPNB1AK53 854 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 IDEP14735 1019 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 FAM114A1Q8IWE2 563 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 CERS3Q8IU89 383 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 CETN2P41208 172 aa22.62■■□□□ 1.21
PCDH8-202ENST00000377942 FAM177A1Q8N128 213 aaPredicted RBP22.62■■□□□ 1.21
PCDH8-202ENST00000377942 NEMFO60524 1076 aa22.61■■□□□ 1.21
PCDH8-202ENST00000377942 PHKG2P15735 406 aa22.61■■□□□ 1.21
PCDH8-202ENST00000377942 RMND1Q9NWS8 449 aa22.61■■□□□ 1.21
PCDH8-202ENST00000377942 ZSCAN30Q86W11 494 aa22.61■■□□□ 1.21
PCDH8-202ENST00000377942 HIBADHP31937 336 aaKnown RBP22.6■■□□□ 1.21
PCDH8-202ENST00000377942 C6orf50Q9HD87 102 aa22.6■■□□□ 1.21
PCDH8-202ENST00000377942 HCLS1P14317 486 aaPredicted RBP22.6■■□□□ 1.21
PCDH8-202ENST00000377942 MIGA1Q8NAN2 632 aa22.6■■□□□ 1.21
PCDH8-202ENST00000377942 SYKP43405 635 aa22.6■■□□□ 1.21
PCDH8-202ENST00000377942 JAKMIP3Q5VZ66 844 aa22.59■■□□□ 1.21
PCDH8-202ENST00000377942 INTS4Q96HW7 963 aaKnown RBP22.59■■□□□ 1.21
PCDH8-202ENST00000377942 UVSSAQ2YD98 709 aa22.59■■□□□ 1.21
PCDH8-202ENST00000377942 TIMM10P62072 90 aa22.59■■□□□ 1.21
PCDH8-202ENST00000377942 ARAP3Q8WWN8 1544 aa22.58■■□□□ 1.21
PCDH8-202ENST00000377942 NF2P35240 595 aa22.58■■□□□ 1.21
PCDH8-202ENST00000377942 GSDMDP57764 484 aa22.58■■□□□ 1.21
PCDH8-202ENST00000377942 HEATR3Q7Z4Q2 680 aa22.58■■□□□ 1.21
PCDH8-202ENST00000377942 CCDC150Q8NCX0 1101 aa22.58■■□□□ 1.21
PCDH8-202ENST00000377942 GIGYF1O75420 1035 aaPredicted RBP22.58■■□□□ 1.2
PCDH8-202ENST00000377942 MTIF2P46199 727 aaKnown RBP22.58■■□□□ 1.2
PCDH8-202ENST00000377942 NAPAP54920 295 aa22.58■■□□□ 1.2
PCDH8-202ENST00000377942 RUFY3Q7L099 469 aa22.58■■□□□ 1.2
PCDH8-202ENST00000377942 SUCLG2Q96I99 432 aa22.58■■□□□ 1.2
PCDH8-202ENST00000377942 ZNF165P49910 485 aa22.58■■□□□ 1.2
PCDH8-202ENST00000377942 LPIN2Q92539 896 aa22.58■■□□□ 1.2
PCDH8-202ENST00000377942 CLIP2Q9UDT6 1046 aa22.58■■□□□ 1.2
PCDH8-202ENST00000377942 YEATS4O95619 227 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 XAGE2Q96GT9 111 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 USP26Q9BXU7 913 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 MAST3O60307 1309 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 RIMBP2O15034 1052 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 UFL1O94874 794 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 F13A1P00488 732 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 GGA1Q9UJY5 639 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 MBD4O95243 580 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 TCIRG1Q13488 830 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 RRP36Q96EU6 259 aaKnown RBP22.57■■□□□ 1.2
PCDH8-202ENST00000377942 DBNDD2Q9BQY9 259 aa22.57■■□□□ 1.2
PCDH8-202ENST00000377942 GOLGA6L10A6NI86 522 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 TNNI2P48788 182 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 AK2P54819 239 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 KRI1Q8N9T8 703 aaKnown RBP22.56■■□□□ 1.2
PCDH8-202ENST00000377942 WDR66Q8TBY9 1149 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 MRPS27Q92552 414 aaKnown RBP22.56■■□□□ 1.2
PCDH8-202ENST00000377942 APPBP2Q92624 585 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 SAMM50Q9Y512 469 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 PANK2Q9BZ23 570 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 MROH5Q6ZUA9 1318 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 TRIM75PA6NK02 468 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 VEZTQ9HBM0 779 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 CCDC40Q4G0X9 1142 aa22.56■■□□□ 1.2
PCDH8-202ENST00000377942 PAXIP1Q6ZW49 1069 aaPredicted RBP22.56■■□□□ 1.2
PCDH8-202ENST00000377942 RBM28Q9NW13 759 aaKnown RBP22.56■■□□□ 1.2
PCDH8-202ENST00000377942 PPFIA3O75145 1194 aa22.55■■□□□ 1.2
PCDH8-202ENST00000377942 B4DLN1 442 aa22.55■■□□□ 1.2
PCDH8-202ENST00000377942 TBCAO75347 108 aaKnown RBP22.55■■□□□ 1.2
PCDH8-202ENST00000377942 MRPL12P52815 198 aaKnown RBP22.55■■□□□ 1.2
PCDH8-202ENST00000377942 BIN1O00499 593 aa22.55■■□□□ 1.2
PCDH8-202ENST00000377942 GNA11P29992 359 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 ARHGEF25Q86VW2 580 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 USO1O60763 962 aaKnown RBP22.54■■□□□ 1.2
PCDH8-202ENST00000377942 SMARCC2Q8TAQ2 1214 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 ARHGAP31Q2M1Z3 1444 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 PTPN14Q15678 1187 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 TEX11Q8IYF3 940 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 EXOC1Q9NV70 894 aa22.54■■□□□ 1.2
PCDH8-202ENST00000377942 KIF5CO60282 957 aa22.53■■□□□ 1.2
PCDH8-202ENST00000377942 TMEM87BQ96K49 555 aa22.53■■□□□ 1.2
PCDH8-202ENST00000377942 NUP88Q99567 741 aaPredicted RBP22.53■■□□□ 1.2
PCDH8-202ENST00000377942 BRAPQ7Z569 592 aa22.53■■□□□ 1.2
PCDH8-202ENST00000377942 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
PCDH8-202ENST00000377942 CLASP1Q7Z460 1538 aa22.53■■□□□ 1.2
PCDH8-202ENST00000377942 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
PCDH8-202ENST00000377942 SH2D4AQ9H788 454 aa22.53■■□□□ 1.2
PCDH8-202ENST00000377942 NEURL1BA8MQ27 555 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 CARD10Q9BWT7 1032 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 ROBO2Q9HCK4 1378 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 KIF1BO60333 1816 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 APOBRQ0VD83 1088 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 GTPBP4Q9BZE4 634 aaKnown RBP22.52■■□□□ 1.2
PCDH8-202ENST00000377942 USP25Q9UHP3 1055 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 SYNMO15061 1565 aa22.52■■□□□ 1.2
PCDH8-202ENST00000377942 USP6P35125 1406 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms