RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 ERCC5P28715 1186 aaPredicted RBP16.44■□□□□ 0.22
PCDH17-201ENST00000377918 CCDC125Q86Z20 511 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 CDC5LQ99459 802 aaKnown RBP16.44■□□□□ 0.22
PCDH17-201ENST00000377918 TRMT1Q9NXH9 659 aaKnown RBP16.44■□□□□ 0.22
PCDH17-201ENST00000377918 CALM1P0DP23 149 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 CALM2P0DP24 149 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 CALM3P0DP25 149 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 FGD6Q6ZV73 1430 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 MFSD6Q6ZSS7 791 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 HAUS7Q99871 368 aa16.44■□□□□ 0.22
PCDH17-201ENST00000377918 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
PCDH17-201ENST00000377918 NAP1L4Q99733 375 aaKnown RBP16.44■□□□□ 0.22
PCDH17-201ENST00000377918 SEPT8Q92599 483 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 INPP1P49441 399 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 KCNG1Q9UIX4 513 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 CCDC42Q96M95 316 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 DNA2P51530 1060 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 CDAN1Q8IWY9 1227 aa16.43■□□□□ 0.22
PCDH17-201ENST00000377918 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
PCDH17-201ENST00000377918 SELENOSQ9BQE4 189 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
PCDH17-201ENST00000377918 E7EVH7 732 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 TSKSQ9UJT2 592 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 POGZQ7Z3K3 1410 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 KRT3P12035 628 aa16.42■□□□□ 0.22
PCDH17-201ENST00000377918 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCDH17-201ENST00000377918 DDX27Q96GQ7 796 aaKnown RBP16.42■□□□□ 0.22
PCDH17-201ENST00000377918 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
PCDH17-201ENST00000377918 ZC4H2Q9NQZ6 224 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 SDCCAG3Q96C92 435 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 MYL6BP14649 208 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 ARHGAP4P98171 946 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
PCDH17-201ENST00000377918 OGFRQ9NZT2 677 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 MAIP1Q8WWC4 291 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 FAM8A1Q9UBU6 413 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 PFDN6O15212 129 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 GLT8D2Q9H1C3 349 aa16.41■□□□□ 0.22
PCDH17-201ENST00000377918 STX10O60499 249 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
PCDH17-201ENST00000377918 MTMR3Q13615 1198 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
PCDH17-201ENST00000377918 PLCB3Q01970 1234 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 TRIML1Q8N9V2 468 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 UBE2Q2Q8WVN8 375 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 EPS15L1Q9UBC2 864 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 NBPF6Q5VWK0 638 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 NBPF4Q96M43 638 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
PCDH17-201ENST00000377918 HSPA1LP34931 641 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 TNPO1Q92973 898 aaKnown RBP16.4■□□□□ 0.22
PCDH17-201ENST00000377918 NRBF2Q96F24 287 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 IBSPP21815 317 aaPredicted RBP16.4■□□□□ 0.22
PCDH17-201ENST00000377918 PHLDB3Q6NSJ2 640 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 FAM13AO94988 1023 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 AFAP1L1Q8TED9 768 aa16.4■□□□□ 0.22
PCDH17-201ENST00000377918 CRNKL1Q9BZJ0 848 aaKnown RBP16.4■□□□□ 0.22
PCDH17-201ENST00000377918 ZEB2O60315 1214 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
PCDH17-201ENST00000377918 NSMCE1Q8WV22 266 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 KCNK9Q9NPC2 374 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
PCDH17-201ENST00000377918 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
PCDH17-201ENST00000377918 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 IDEP14735 1019 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 TAF12Q16514 161 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 GBP5Q96PP8 586 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 SYCE1Q8N0S2 351 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 TPCN1Q9ULQ1 816 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 CUL7Q14999 1698 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
PCDH17-201ENST00000377918 SLC8A1P32418 973 aa16.38■□□□□ 0.21
PCDH17-201ENST00000377918 P3H4Q92791 437 aa16.38■□□□□ 0.21
PCDH17-201ENST00000377918 FAM200AQ8TCP9 573 aa16.38■□□□□ 0.21
PCDH17-201ENST00000377918 ERBINQ96RT1 1412 aa16.38■□□□□ 0.21
PCDH17-201ENST00000377918 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
PCDH17-201ENST00000377918 ARHGEF2Q92974 986 aaKnown RBP16.38■□□□□ 0.21
PCDH17-201ENST00000377918 KIF14Q15058 1648 aa16.38■□□□□ 0.21
PCDH17-201ENST00000377918 GNAT2P19087 354 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms