RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ATP2B4P23634 1241 aa26.19■■□□□ 1.78
CBWD3-202ENST00000377342 DPP8Q6V1X1 898 aaPredicted RBP26.19■■□□□ 1.78
CBWD3-202ENST00000377342 ZBTB47Q9UFB7 747 aaPredicted RBP26.19■■□□□ 1.78
CBWD3-202ENST00000377342 TMX4Q9H1E5 349 aaPredicted RBP26.18■■□□□ 1.78
CBWD3-202ENST00000377342 SLC5A1P13866 664 aa26.17■■□□□ 1.78
CBWD3-202ENST00000377342 KCNJ4P48050 445 aa26.17■■□□□ 1.78
CBWD3-202ENST00000377342 SOGA3Q5TF21 947 aa26.17■■□□□ 1.78
CBWD3-202ENST00000377342 XAGE2Q96GT9 111 aa26.17■■□□□ 1.78
CBWD3-202ENST00000377342 NEUROD6Q96NK8 337 aa26.17■■□□□ 1.78
CBWD3-202ENST00000377342 RTFDC1Q9BY42 306 aaPredicted RBP26.17■■□□□ 1.78
CBWD3-202ENST00000377342 MED23Q9ULK4 1368 aa26.17■■□□□ 1.78
CBWD3-202ENST00000377342 TXNRD3Q86VQ6 643 aa26.16■■□□□ 1.78
CBWD3-202ENST00000377342 AKAP11Q9UKA4 1901 aa26.16■■□□□ 1.78
CBWD3-202ENST00000377342 IFIT2P09913 472 aaKnown RBP26.15■■□□□ 1.78
CBWD3-202ENST00000377342 IFIT1P09914 478 aaKnown RBP26.15■■□□□ 1.78
CBWD3-202ENST00000377342 C15orf52Q6ZUT6 534 aaKnown RBP26.15■■□□□ 1.78
CBWD3-202ENST00000377342 RTKN2Q8IZC4 609 aa26.15■■□□□ 1.78
CBWD3-202ENST00000377342 UTRNP46939 3433 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 CHD4Q14839 1912 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 C6orf229H3BNL8 230 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 YBX3P16989 372 aaKnown RBP eCLIP26.14■■□□□ 1.78
CBWD3-202ENST00000377342 CCDC88AQ3V6T2 1871 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 GRIPAP1Q4V328 841 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 TSHZ3Q63HK5 1081 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 PSMD1Q99460 953 aa26.14■■□□□ 1.78
CBWD3-202ENST00000377342 COL4A5P29400 1685 aa26.14■■□□□ 1.77
CBWD3-202ENST00000377342 NFKBIEO00221 500 aa26.13■■□□□ 1.77
CBWD3-202ENST00000377342 MX1P20591 662 aa26.13■■□□□ 1.77
CBWD3-202ENST00000377342 PLEKHM2Q8IWE5 1019 aa26.13■■□□□ 1.77
CBWD3-202ENST00000377342 ZNF646O15015 1829 aaPredicted RBP26.13■■□□□ 1.77
CBWD3-202ENST00000377342 SBF1O95248 1867 aa26.12■■□□□ 1.77
CBWD3-202ENST00000377342 PHKA1P46020 1223 aa26.12■■□□□ 1.77
CBWD3-202ENST00000377342 GYG1P46976 350 aa26.12■■□□□ 1.77
CBWD3-202ENST00000377342 PDE1AP54750 535 aa26.11■■□□□ 1.77
CBWD3-202ENST00000377342 FKBP4Q02790 459 aaKnown RBP eCLIP26.11■■□□□ 1.77
CBWD3-202ENST00000377342 FAM84BQ96KN1 310 aaPredicted RBP26.11■■□□□ 1.77
CBWD3-202ENST00000377342 SCN9AQ15858 1988 aa26.1■■□□□ 1.77
CBWD3-202ENST00000377342 COL1A1P02452 1464 aaPredicted RBP26.1■■□□□ 1.77
CBWD3-202ENST00000377342 BCAMP50895 628 aa26.1■■□□□ 1.77
CBWD3-202ENST00000377342 CCDC102BQ68D86 513 aa26.1■■□□□ 1.77
CBWD3-202ENST00000377342 STAP2Q9UGK3 403 aa26.1■■□□□ 1.77
CBWD3-202ENST00000377342 LTBP3Q9NS15 1303 aa26.1■■□□□ 1.77
CBWD3-202ENST00000377342 FBXO33Q7Z6M2 555 aa26.09■■□□□ 1.77
CBWD3-202ENST00000377342 PI4K2BQ8TCG2 481 aa26.09■■□□□ 1.77
CBWD3-202ENST00000377342 RGS3P49796 1198 aa26.09■■□□□ 1.77
CBWD3-202ENST00000377342 TAOK3Q9H2K8 898 aa26.09■■□□□ 1.77
CBWD3-202ENST00000377342 ECHDC1Q9NTX5 307 aa26.09■■□□□ 1.77
CBWD3-202ENST00000377342 DICER1Q9UPY3 1922 aaKnown RBP26.09■■□□□ 1.77
CBWD3-202ENST00000377342 PSME4Q14997 1843 aa26.08■■□□□ 1.77
CBWD3-202ENST00000377342 TTC41PQ6P2S7 1318 aa26.08■■□□□ 1.77
CBWD3-202ENST00000377342 RASSF7Q02833 373 aa26.08■■□□□ 1.77
CBWD3-202ENST00000377342 SUPT20HQ8NEM7 779 aa26.08■■□□□ 1.77
CBWD3-202ENST00000377342 EYA3Q99504 573 aa26.08■■□□□ 1.77
CBWD3-202ENST00000377342 OSBPL3Q9H4L5 887 aa26.08■■□□□ 1.77
CBWD3-202ENST00000377342 RIMBP2O15034 1052 aa26.07■■□□□ 1.76
CBWD3-202ENST00000377342 KIAA2012Q0VF49 1180 aa26.07■■□□□ 1.76
CBWD3-202ENST00000377342 SCARF1Q14162 830 aa26.07■■□□□ 1.76
CBWD3-202ENST00000377342 WASHC4Q2M389 1173 aa26.07■■□□□ 1.76
CBWD3-202ENST00000377342 GORABQ5T7V8 394 aa26.07■■□□□ 1.76
CBWD3-202ENST00000377342 ZNF277Q9NRM2 450 aaPredicted RBP26.07■■□□□ 1.76
CBWD3-202ENST00000377342 AOX1Q06278 1338 aa26.07■■□□□ 1.76
CBWD3-202ENST00000377342 ARID4AP29374 1257 aaPredicted RBP26.06■■□□□ 1.76
CBWD3-202ENST00000377342 PRELPP51888 382 aa26.06■■□□□ 1.76
CBWD3-202ENST00000377342 AOC3Q16853 763 aa26.06■■□□□ 1.76
CBWD3-202ENST00000377342 PELP1Q8IZL8 1130 aaKnown RBP26.06■■□□□ 1.76
CBWD3-202ENST00000377342 AK9Q5TCS8 1911 aa26.06■■□□□ 1.76
CBWD3-202ENST00000377342 MYO5AQ9Y4I1 1855 aaKnown RBP26.06■■□□□ 1.76
CBWD3-202ENST00000377342 HIBADHP31937 336 aaKnown RBP26.06■■□□□ 1.76
CBWD3-202ENST00000377342 CAVIN4Q5BKX8 364 aa26.06■■□□□ 1.76
CBWD3-202ENST00000377342 GPATCH3Q96I76 525 aa26.06■■□□□ 1.76
CBWD3-202ENST00000377342 ATP5JP18859 108 aa26.05■■□□□ 1.76
CBWD3-202ENST00000377342 CCDC158Q5M9N0 1113 aa26.05■■□□□ 1.76
CBWD3-202ENST00000377342 TTC39AQ5SRH9 613 aa26.05■■□□□ 1.76
CBWD3-202ENST00000377342 ZNF512BQ96KM6 892 aaPredicted RBP26.05■■□□□ 1.76
CBWD3-202ENST00000377342 ZC3H12CQ9C0D7 883 aaKnown RBP26.05■■□□□ 1.76
CBWD3-202ENST00000377342 DOCK2Q92608 1830 aa26.04■■□□□ 1.76
CBWD3-202ENST00000377342 PPIP5K2O43314 1243 aa26.04■■□□□ 1.76
CBWD3-202ENST00000377342 RASGRF1Q13972 1273 aa26.04■■□□□ 1.76
CBWD3-202ENST00000377342 ZNF804AQ7Z570 1209 aa26.04■■□□□ 1.76
CBWD3-202ENST00000377342 MCAMP43121 646 aa26.03■■□□□ 1.76
CBWD3-202ENST00000377342 PI16Q6UXB8 463 aa26.03■■□□□ 1.76
CBWD3-202ENST00000377342 IQSEC3Q9UPP2 1182 aaPredicted RBP26.03■■□□□ 1.76
CBWD3-202ENST00000377342 TIAM2Q8IVF5 1701 aa26.03■■□□□ 1.76
CBWD3-202ENST00000377342 IARSP41252 1262 aaKnown RBP26.03■■□□□ 1.76
CBWD3-202ENST00000377342 CD209Q9NNX6 404 aa26.03■■□□□ 1.76
CBWD3-202ENST00000377342 ZBTB22O15209 634 aa26.02■■□□□ 1.76
CBWD3-202ENST00000377342 VPS37DQ86XT2 251 aa26.02■■□□□ 1.76
CBWD3-202ENST00000377342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.02■■□□□ 1.76
CBWD3-202ENST00000377342 COA1Q9GZY4 146 aa26.02■■□□□ 1.76
CBWD3-202ENST00000377342 GLRX3O76003 335 aaKnown RBP26.01■■□□□ 1.75
CBWD3-202ENST00000377342 UQCRFS1P1P0C7P4 283 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 IL1R1P14778 569 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 GSPT1P15170 499 aaKnown RBP26.01■■□□□ 1.75
CBWD3-202ENST00000377342 DOK7Q18PE1 504 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 ARHGAP27Q6ZUM4 889 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 TDRD7Q8NHU6 1098 aaKnown RBP26.01■■□□□ 1.75
CBWD3-202ENST00000377342 VPS33BQ9H267 617 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 BOLA2Q9H3K6 86 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 DBNDD1Q9H9R9 158 aa26.01■■□□□ 1.75
CBWD3-202ENST00000377342 NDUFB9Q9Y6M9 179 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms