RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 LMTK3Q96Q04 1460 aa19.59■□□□□ 0.73
MCF2L-203ENST00000375604 RNMTO43148 476 aaKnown RBP19.59■□□□□ 0.73
MCF2L-203ENST00000375604 TAF5LO75529 589 aa19.59■□□□□ 0.73
MCF2L-203ENST00000375604 GCP02774 474 aa19.59■□□□□ 0.73
MCF2L-203ENST00000375604 KCNA6P17658 529 aa19.59■□□□□ 0.73
MCF2L-203ENST00000375604 IL15P40933 162 aaPredicted RBP19.59■□□□□ 0.73
MCF2L-203ENST00000375604 RBM25P49756 843 aaKnown RBP19.59■□□□□ 0.73
MCF2L-203ENST00000375604 SPECC1Q5M775 1068 aa19.59■□□□□ 0.73
MCF2L-203ENST00000375604 FAM107BQ9H098 131 aa19.59■□□□□ 0.73
MCF2L-203ENST00000375604 RNF113AO15541 343 aaKnown RBP19.58■□□□□ 0.73
MCF2L-203ENST00000375604 TPTE2Q6XPS3 522 aa19.58■□□□□ 0.73
MCF2L-203ENST00000375604 TRAPPC8Q9Y2L5 1435 aa19.58■□□□□ 0.73
MCF2L-203ENST00000375604 CEP85Q6P2H3 762 aa19.58■□□□□ 0.73
MCF2L-203ENST00000375604 NYXQ9GZU5 481 aa19.58■□□□□ 0.73
MCF2L-203ENST00000375604 MAP3K5Q99683 1374 aa19.58■□□□□ 0.72
MCF2L-203ENST00000375604 AK2P54819 239 aa19.58■□□□□ 0.72
MCF2L-203ENST00000375604 A2MP01023 1474 aa19.58■□□□□ 0.72
MCF2L-203ENST00000375604 ANKRD44Q8N8A2 993 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 TIMM10P62072 90 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 GPIHBP1Q8IV16 184 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 FAM114A1Q8IWE2 563 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 RRP36Q96EU6 259 aaKnown RBP19.57■□□□□ 0.72
MCF2L-203ENST00000375604 MAP3K1Q13233 1512 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 GNG11P61952 73 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
MCF2L-203ENST00000375604 LDHBP07195 334 aaKnown RBP19.57■□□□□ 0.72
MCF2L-203ENST00000375604 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
MCF2L-203ENST00000375604 FAM98CQ17RN3 349 aaKnown RBP19.57■□□□□ 0.72
MCF2L-203ENST00000375604 ATP10BO94823 1461 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 CHMP2AO43633 222 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 CEP135Q66GS9 1140 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 TCHPQ9BT92 498 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 ARMT1Q9H993 441 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 IL16Q14005 1332 aa19.57■□□□□ 0.72
MCF2L-203ENST00000375604 ATP2C2O75185 946 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 STXBP4Q6ZWJ1 553 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 CREB3L3Q68CJ9 461 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 CNNM2Q9H8M5 875 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 TRAPPC3LQ5T215 181 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 DACT1Q9NYF0 836 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 KRT2P35908 639 aa19.56■□□□□ 0.72
MCF2L-203ENST00000375604 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-203ENST00000375604 PAIP2Q9BPZ3 127 aaKnown RBP19.56■□□□□ 0.72
MCF2L-203ENST00000375604 MBD4O95243 580 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 ORAI2Q96SN7 254 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 HMGB2P26583 209 aaKnown RBP19.55■□□□□ 0.72
MCF2L-203ENST00000375604 TBC1D5Q92609 795 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 LGR6Q9HBX8 967 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 UFL1O94874 794 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-203ENST00000375604 ERMNQ8TAM6 284 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 A0A1W2PP64 1363 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 PLCH2O75038 1416 aa19.55■□□□□ 0.72
MCF2L-203ENST00000375604 SHTN1A0MZ66 631 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 HARSP12081 509 aaKnown RBP19.54■□□□□ 0.72
MCF2L-203ENST00000375604 ZNF174Q15697 407 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 CTR9Q6PD62 1173 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 CAPZA3Q96KX2 299 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 SPDYE3A6NKU9 549 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 NBPF7P0C2Y1 421 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-203ENST00000375604 ITGA6P23229 1130 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 MAP3K9P80192 1104 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 SMARCC1Q92922 1105 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-203ENST00000375604 MPHOSPH6Q99547 160 aaKnown RBP19.54■□□□□ 0.72
MCF2L-203ENST00000375604 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 POLD1P28340 1107 aa19.54■□□□□ 0.72
MCF2L-203ENST00000375604 OTUD7AQ8TE49 926 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-203ENST00000375604 ZSCAN16Q9H4T2 348 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-203ENST00000375604 MAP9Q49MG5 647 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 MAEAQ7L5Y9 396 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 RALGAPBQ86X10 1494 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 RBM17Q96I25 401 aaKnown RBP19.53■□□□□ 0.72
MCF2L-203ENST00000375604 RTL1A6NKG5 1358 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 ZFYP08048 801 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-203ENST00000375604 JDP2Q8WYK2 163 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.53■□□□□ 0.724e-7■■□□□ 14
MCF2L-203ENST00000375604 V9GYY5 206 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-203ENST00000375604 AKR1B10O60218 316 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 KANK3Q6NY19 840 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 VAMP4O75379 141 aa19.53■□□□□ 0.72
MCF2L-203ENST00000375604 CCNL1Q9UK58 526 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-203ENST00000375604 EEF2P13639 858 aaKnown RBP19.52■□□□□ 0.72
MCF2L-203ENST00000375604 MSL1Q68DK7 614 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 B4E1Z4 1266 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 GCOM1H8Y6P7 765 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-203ENST00000375604 MYZAPP0CAP1 466 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 PUS7Q96PZ0 661 aaKnown RBP19.52■□□□□ 0.72
MCF2L-203ENST00000375604 DDX39AO00148 427 aaKnown RBP19.52■□□□□ 0.72
MCF2L-203ENST00000375604 F13A1P00488 732 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 A1BGP04217 495 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 ERCC3P19447 782 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 LMOD1P29536 600 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-203ENST00000375604 TCP10Q12799 353 aa19.52■□□□□ 0.72
MCF2L-203ENST00000375604 ALDH1L1O75891 902 aa19.52■□□□□ 0.71
MCF2L-203ENST00000375604 SEC24BO95487 1268 aa19.52■□□□□ 0.71
MCF2L-203ENST00000375604 PPP4R3BQ5MIZ7 849 aa19.52■□□□□ 0.71
MCF2L-203ENST00000375604 PCDH11XQ9BZA7 1347 aa19.52■□□□□ 0.71
MCF2L-203ENST00000375604 PCDH11YQ9BZA8 1340 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms