RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 FAM227BQ96M60 508 aa23.25■■□□□ 1.31
NECAB3-202ENST00000375238 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
NECAB3-202ENST00000375238 TAF5LO75529 589 aa23.25■■□□□ 1.31
NECAB3-202ENST00000375238 LPIN2Q92539 896 aa23.25■■□□□ 1.31
NECAB3-202ENST00000375238 RFX7Q2KHR2 1363 aa23.25■■□□□ 1.31
NECAB3-202ENST00000375238 FGFR2P21802 821 aa23.24■■□□□ 1.31
NECAB3-202ENST00000375238 SLC5A1P13866 664 aa23.23■■□□□ 1.31
NECAB3-202ENST00000375238 CHRNDQ07001 517 aa23.23■■□□□ 1.31
NECAB3-202ENST00000375238 KBTBD3Q8NAB2 608 aa23.23■■□□□ 1.31
NECAB3-202ENST00000375238 UPF3BQ9BZI7 483 aaKnown RBP23.23■■□□□ 1.31
NECAB3-202ENST00000375238 A0A0D9SFI3 127 aa23.23■■□□□ 1.31
NECAB3-202ENST00000375238 FKBP4Q02790 459 aaKnown RBP eCLIP23.23■■□□□ 1.311e-6■■■■■ 28.9
NECAB3-202ENST00000375238 A0A1B0GUL6 1792 aa23.22■■□□□ 1.31
NECAB3-202ENST00000375238 CELF1Q92879 486 aaKnown RBP23.22■■□□□ 1.31
NECAB3-202ENST00000375238 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
NECAB3-202ENST00000375238 BSDC1Q9NW68 430 aaPredicted RBP23.22■■□□□ 1.31
NECAB3-202ENST00000375238 ISY1Q9ULR0 285 aaKnown RBP23.22■■□□□ 1.31
NECAB3-202ENST00000375238 TM4SF1P30408 202 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 PRR5LQ6MZQ0 368 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 INTS4Q96HW7 963 aaKnown RBP23.21■■□□□ 1.31
NECAB3-202ENST00000375238 SNX14Q9Y5W7 946 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 SERPINB2P05120 415 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 MRE11P49959 708 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 SCARF1Q14162 830 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 KLHL40Q2TBA0 621 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 MCTP1Q6DN14 999 aa23.21■■□□□ 1.31
NECAB3-202ENST00000375238 RTN4Q9NQC3 1192 aaKnown RBP23.21■■□□□ 1.31
NECAB3-202ENST00000375238 SNAP23O00161 211 aa23.2■■□□□ 1.3
NECAB3-202ENST00000375238 COL23A1Q86Y22 540 aaPredicted RBP23.2■■□□□ 1.3
NECAB3-202ENST00000375238 LMBRD1Q9NUN5 540 aa23.2■■□□□ 1.3
NECAB3-202ENST00000375238 RPS8P62241 208 aaKnown RBP23.2■■□□□ 1.3
NECAB3-202ENST00000375238 ST5P78524 1137 aa23.2■■□□□ 1.3
NECAB3-202ENST00000375238 CCDC102BQ68D86 513 aa23.2■■□□□ 1.3
NECAB3-202ENST00000375238 RASEFQ8IZ41 740 aa23.2■■□□□ 1.3
NECAB3-202ENST00000375238 AKAP11Q9UKA4 1901 aa23.19■■□□□ 1.3
NECAB3-202ENST00000375238 PHKA1P46020 1223 aa23.19■■□□□ 1.3
NECAB3-202ENST00000375238 GAS2L3Q86XJ1 694 aa23.19■■□□□ 1.3
NECAB3-202ENST00000375238 FLAD1Q8NFF5 587 aa23.19■■□□□ 1.3
NECAB3-202ENST00000375238 ZNF512BQ96KM6 892 aaPredicted RBP23.19■■□□□ 1.3
NECAB3-202ENST00000375238 UQCRFS1P1P0C7P4 283 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 MCAMP43121 646 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 ZAP70P43403 619 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 DDR1Q08345 913 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 PANK2Q9BZ23 570 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 MED23Q9ULK4 1368 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 PTH1RQ03431 593 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 PI16Q6UXB8 463 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 NOL8Q76FK4 1167 aaKnown RBP23.18■■□□□ 1.3
NECAB3-202ENST00000375238 GRPEL1Q9HAV7 217 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 MINPP1Q9UNW1 487 aa23.18■■□□□ 1.3
NECAB3-202ENST00000375238 DDX49Q9Y6V7 483 aaKnown RBP23.18■■□□□ 1.3
NECAB3-202ENST00000375238 CCDC171Q6TFL3 1326 aa23.17■■□□□ 1.3
NECAB3-202ENST00000375238 POLRMTO00411 1230 aaKnown RBP23.17■■□□□ 1.3
NECAB3-202ENST00000375238 CHGBP05060 677 aa23.17■■□□□ 1.3
NECAB3-202ENST00000375238 TTC14Q96N46 770 aa23.17■■□□□ 1.3
NECAB3-202ENST00000375238 BRD1O95696 1058 aa23.16■■□□□ 1.3
NECAB3-202ENST00000375238 ARID4AP29374 1257 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-202ENST00000375238 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-202ENST00000375238 TICAM2Q86XR7 235 aa23.16■■□□□ 1.3
NECAB3-202ENST00000375238 EZH2Q15910 746 aaKnown RBP23.16■■□□□ 1.3
NECAB3-202ENST00000375238 ZNF589Q86UQ0 364 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-202ENST00000375238 NLGN1Q8N2Q7 840 aa23.16■■□□□ 1.3
NECAB3-202ENST00000375238 KCNB2Q92953 911 aa23.15■■□□□ 1.3
NECAB3-202ENST00000375238 MYH7P12883 1935 aa23.15■■□□□ 1.3
NECAB3-202ENST00000375238 RNF113AO15541 343 aaKnown RBP23.14■■□□□ 1.3
NECAB3-202ENST00000375238 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.3
NECAB3-202ENST00000375238 MCMDC2Q4G0Z9 681 aa23.14■■□□□ 1.3
NECAB3-202ENST00000375238 PNPLA7Q6ZV29 1317 aa23.14■■□□□ 1.3
NECAB3-202ENST00000375238 KCNJ4P48050 445 aa23.14■■□□□ 1.29
NECAB3-202ENST00000375238 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.29
NECAB3-202ENST00000375238 CAMKK2Q96RR4 588 aa23.14■■□□□ 1.29
NECAB3-202ENST00000375238 SEC62Q99442 399 aaKnown RBP23.14■■□□□ 1.29
NECAB3-202ENST00000375238 UBE4AQ14139 1066 aa23.13■■□□□ 1.29
NECAB3-202ENST00000375238 BCAMP50895 628 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 GRAPQ13588 217 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 SLFNL1Q499Z3 407 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 ZMYM1Q5SVZ6 1142 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 CCDC129Q6ZRS4 1044 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 GRAPLQ8TC17 118 aaPredicted RBP23.12■■□□□ 1.29
NECAB3-202ENST00000375238 CHAMP1Q96JM3 812 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 HELLSQ9NRZ9 838 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 TTF1Q15361 905 aaPredicted RBP23.12■■□□□ 1.29
NECAB3-202ENST00000375238 PRPF40BQ6NWY9 871 aaKnown RBP23.12■■□□□ 1.29
NECAB3-202ENST00000375238 MAP4K1Q92918 833 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 ANKRD2Q9GZV1 360 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 HMG20BQ9P0W2 317 aa23.12■■□□□ 1.29
NECAB3-202ENST00000375238 RBM8AQ9Y5S9 174 aaKnown RBP23.12■■□□□ 1.29
NECAB3-202ENST00000375238 PRPF40AO75400 957 aaKnown RBP23.11■■□□□ 1.29
NECAB3-202ENST00000375238 SPATA5Q8NB90 893 aa23.11■■□□□ 1.29
NECAB3-202ENST00000375238 ZFYP08048 801 aaPredicted RBP23.1■■□□□ 1.29
NECAB3-202ENST00000375238 AK2P54819 239 aa23.1■■□□□ 1.29
NECAB3-202ENST00000375238 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
NECAB3-202ENST00000375238 RASGRF1Q13972 1273 aa23.1■■□□□ 1.29
NECAB3-202ENST00000375238 NECTIN1Q15223 517 aa23.1■■□□□ 1.29
NECAB3-202ENST00000375238 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
NECAB3-202ENST00000375238 MYO5AQ9Y4I1 1855 aaKnown RBP23.1■■□□□ 1.29
NECAB3-202ENST00000375238 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
NECAB3-202ENST00000375238 FOXD4L5Q5VV16 416 aaPredicted RBP23.1■■□□□ 1.29
NECAB3-202ENST00000375238 RUFY3Q7L099 469 aa23.1■■□□□ 1.29
NECAB3-202ENST00000375238 FOXD4L4Q8WXT5 416 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms