RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 STAMBPO95630 424 aa14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 LGR6Q9HBX8 967 aa14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 CWF19L2Q2TBE0 894 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 ZFYP08048 801 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 MTIF2P46199 727 aaKnown RBP14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 ST5P78524 1137 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 ATP2B3Q16720 1220 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 TMEM266Q2M3C6 531 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 EHBP1Q8NDI1 1231 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 NIP7Q9Y221 180 aaKnown RBP eCLIP14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 GOLGA8AA7E2F4 631 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 POLR3DP05423 398 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 SNRKQ9NRH2 765 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 NRXN1Q9ULB1 1477 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 ANAPC15P60006 121 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 NOLC1Q14978 699 aaKnown RBP eCLIP14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 MAATS1Q7Z4T9 603 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 HOOK3Q86VS8 718 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 A2ML1A8K2U0 1454 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 LDHCP07864 332 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 UBE4AQ14139 1066 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 G2E3Q7L622 706 aa14.07□□□□□ -0.16
NPLOC4-202ENST00000374747 NF2P35240 595 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 CCT2P78371 535 aaKnown RBP14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 DDX17Q92841 729 aaKnown RBP14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 NLRP3Q96P20 1036 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 USP6P35125 1406 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 KANK3Q6NY19 840 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 NYXQ9GZU5 481 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 SPTY2D1Q68D10 685 aaPredicted RBP14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 IQCA1Q86XH1 822 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 CTNNBL1Q8WYA6 563 aaPredicted RBP14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 UBA5Q9GZZ9 404 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 CCDC194A0A1B0GVG4 234 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 MNAT1P51948 309 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 CEP112Q8N8E3 955 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 PLBD2Q8NHP8 589 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 MKNK2Q9HBH9 465 aa14.06□□□□□ -0.16
NPLOC4-202ENST00000374747 TNIP1Q15025 636 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 LARP6Q9BRS8 491 aaKnown RBP14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 TMCO5BA8MYB1 307 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 C6orf229H3BNL8 230 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 IVLP07476 585 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 FAM114A1Q8IWE2 563 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.162e-8■□□□□ 10.2
NPLOC4-202ENST00000374747 ARFGAP3Q9NP61 516 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 JADE2Q9NQC1 790 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 DCAF8L1A6NGE4 600 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 CCDC102BQ68D86 513 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 GIMAP6Q6P9H5 292 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 CCDC82Q8N4S0 544 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
NPLOC4-202ENST00000374747 TRIM21P19474 475 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 IFIT3O14879 490 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 ZSCAN22P10073 491 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 METTL22Q9BUU2 404 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 PA2G4Q9UQ80 394 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 HSF2BPO75031 334 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 CKAP4Q07065 602 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 TULP4Q9NRJ4 1543 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 MACROD2A1Z1Q3 448 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 NLRP5P59047 1200 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 ADGRB3O60242 1522 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 AMPD3Q01432 767 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 ZKSCAN5Q9Y2L8 839 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
NPLOC4-202ENST00000374747 LMTK2Q8IWU2 1503 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 IRS4O14654 1257 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 SKILP12757 684 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 LIG1P18858 919 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 EIF4A1P60842 406 aaKnown RBP14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 CEP63Q96MT8 703 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 USP16Q9Y5T5 823 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 SHPRHQ149N8 1683 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 TPTE2Q6XPS3 522 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 FAM200AQ8TCP9 573 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 TMX3Q96JJ7 454 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 PRR36Q9H6K5 1346 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 BAG3O95817 575 aa14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-202ENST00000374747 ERVV-2B6SEH9 535 aa14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 CCDC40Q4G0X9 1142 aa14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 NEK1Q96PY6 1258 aa14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 PANK2Q9BZ23 570 aa14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 ZNF444Q8N0Y2 327 aaPredicted RBP14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 ORC3Q9UBD5 711 aaPredicted RBP14.02□□□□□ -0.16
NPLOC4-202ENST00000374747 FSD2A1L4K1 749 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 TUBB4AP04350 444 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms