RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 UTRNP46939 3433 aa18.57■□□□□ 0.56
HSPG2-201ENST00000374673 IFIT1P09914 478 aaKnown RBP18.56■□□□□ 0.56
HSPG2-201ENST00000374673 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
HSPG2-201ENST00000374673 LPIN2Q92539 896 aa18.56■□□□□ 0.56
HSPG2-201ENST00000374673 AKAP2Q9Y2D5 859 aa18.56■□□□□ 0.56
HSPG2-201ENST00000374673 ZNF609O15014 1411 aa18.56■□□□□ 0.56
HSPG2-201ENST00000374673 FZD9O00144 591 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 RAB11FIP3O75154 756 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 SLC5A1P13866 664 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 ATP2B3Q16720 1220 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 COA1Q9GZY4 146 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 DCTPP1Q9H773 170 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 GPR108Q9NPR9 543 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
HSPG2-201ENST00000374673 ZNF646O15015 1829 aaPredicted RBP18.55■□□□□ 0.56
HSPG2-201ENST00000374673 SCN9AQ15858 1988 aa18.55■□□□□ 0.56
HSPG2-201ENST00000374673 ECE2O60344 883 aa18.54■□□□□ 0.56
HSPG2-201ENST00000374673 RHPN1Q8TCX5 695 aa18.54■□□□□ 0.56
HSPG2-201ENST00000374673 KIF1BPQ96EK5 621 aa18.54■□□□□ 0.56
HSPG2-201ENST00000374673 DBNDD1Q9H9R9 158 aa18.54■□□□□ 0.56
HSPG2-201ENST00000374673 ZNRF3Q9ULT6 936 aa18.54■□□□□ 0.56
HSPG2-201ENST00000374673 MYH13Q9UKX3 1938 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 G3V3G9 751 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 DOK7Q18PE1 504 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 DCAF8Q5TAQ9 597 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 ZNF804AQ7Z570 1209 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 PODNQ7Z5L7 613 aa18.53■□□□□ 0.56
HSPG2-201ENST00000374673 YDJCA8MPS7 323 aa18.52■□□□□ 0.56
HSPG2-201ENST00000374673 NEFLP07196 543 aa18.52■□□□□ 0.56
HSPG2-201ENST00000374673 TNNI3KQ59H18 835 aa18.52■□□□□ 0.56
HSPG2-201ENST00000374673 FAM84BQ96KN1 310 aaPredicted RBP18.52■□□□□ 0.56
HSPG2-201ENST00000374673 CD209Q9NNX6 404 aa18.52■□□□□ 0.56
HSPG2-201ENST00000374673 FPGT-TNNI3KV9GXZ4 949 aa18.52■□□□□ 0.56
HSPG2-201ENST00000374673 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
HSPG2-201ENST00000374673 GYG1P46976 350 aa18.51■□□□□ 0.55
HSPG2-201ENST00000374673 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
HSPG2-201ENST00000374673 CAVIN4Q5BKX8 364 aa18.51■□□□□ 0.55
HSPG2-201ENST00000374673 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
HSPG2-201ENST00000374673 RWDD1Q9H446 243 aaPredicted RBP18.51■□□□□ 0.55
HSPG2-201ENST00000374673 ZNF541Q9H0D2 1346 aa18.5■□□□□ 0.55
HSPG2-201ENST00000374673 IL1R1P14778 569 aa18.5■□□□□ 0.55
HSPG2-201ENST00000374673 TIMM10P62072 90 aa18.5■□□□□ 0.55
HSPG2-201ENST00000374673 GCC1Q96CN9 775 aa18.5■□□□□ 0.55
HSPG2-201ENST00000374673 ADORA1P30542 326 aa18.49■□□□□ 0.55
HSPG2-201ENST00000374673 CXCL9Q07325 125 aa18.49■□□□□ 0.55
HSPG2-201ENST00000374673 DPY19L2Q6NUT2 758 aa18.49■□□□□ 0.55
HSPG2-201ENST00000374673 TDRD7Q8NHU6 1098 aaKnown RBP18.49■□□□□ 0.55
HSPG2-201ENST00000374673 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-201ENST00000374673 XAGE2Q96GT9 111 aa18.49■□□□□ 0.55
HSPG2-201ENST00000374673 LRRCC1Q9C099 1032 aa18.49■□□□□ 0.55
HSPG2-201ENST00000374673 WDR90Q96KV7 1748 aa18.49■□□□□ 0.55
HSPG2-201ENST00000374673 GLTPD2A6NH11 291 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 APBB1O00213 710 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 ZBTB22O15209 634 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 BCAMP50895 628 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 CIAPIN1Q6FI81 312 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 VPS37DQ86XT2 251 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
HSPG2-201ENST00000374673 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 IL1RAPL2Q9NP60 686 aa18.48■□□□□ 0.55
HSPG2-201ENST00000374673 IGHDP01880 384 aa18.47■□□□□ 0.55
HSPG2-201ENST00000374673 TNIP1Q15025 636 aa18.47■□□□□ 0.55
HSPG2-201ENST00000374673 SMC5Q8IY18 1101 aa18.47■□□□□ 0.55
HSPG2-201ENST00000374673 GPC2Q8N158 579 aa18.47■□□□□ 0.55
HSPG2-201ENST00000374673 KCNQ5Q9NR82 932 aa18.47■□□□□ 0.55
HSPG2-201ENST00000374673 RAD17O75943 681 aa18.46■□□□□ 0.55
HSPG2-201ENST00000374673 YY1P25490 414 aa18.46■□□□□ 0.55
HSPG2-201ENST00000374673 CCDC102BQ68D86 513 aa18.46■□□□□ 0.55
HSPG2-201ENST00000374673 AACSQ86V21 672 aa18.46■□□□□ 0.55
HSPG2-201ENST00000374673 DBNDD2Q9BQY9 259 aa18.46■□□□□ 0.55
HSPG2-201ENST00000374673 SCN4AP35499 1836 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 USP17L3A6NCW0 530 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 USP17L4A6NCW7 530 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 PSMD14O00487 310 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-201ENST00000374673 VIL1P09327 827 aaKnown RBP18.45■□□□□ 0.54
HSPG2-201ENST00000374673 PHKA1P46020 1223 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 USP17L1Q7RTZ2 530 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 CCDC8Q9H0W5 538 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-201ENST00000374673 GNL3LQ9NVN8 582 aaKnown RBP18.45■□□□□ 0.54
HSPG2-201ENST00000374673 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
HSPG2-201ENST00000374673 FAM205AQ6ZU69 1335 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
HSPG2-201ENST00000374673 SEMA3EO15041 775 aa18.44■□□□□ 0.54
HSPG2-201ENST00000374673 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-201ENST00000374673 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
HSPG2-201ENST00000374673 ERICH6BQ5W0A0 696 aa18.44■□□□□ 0.54
HSPG2-201ENST00000374673 TTLL5Q6EMB2 1281 aa18.44■□□□□ 0.54
HSPG2-201ENST00000374673 TLR7Q9NYK1 1049 aaKnown RBP18.44■□□□□ 0.54
HSPG2-201ENST00000374673 GJA3Q9Y6H8 435 aa18.44■□□□□ 0.54
HSPG2-201ENST00000374673 AKAP11Q9UKA4 1901 aa18.43■□□□□ 0.54
HSPG2-201ENST00000374673 ARID4AP29374 1257 aaPredicted RBP18.43■□□□□ 0.54
HSPG2-201ENST00000374673 GTF2IP78347 998 aa18.43■□□□□ 0.54
HSPG2-201ENST00000374673 CCDC158Q5M9N0 1113 aa18.43■□□□□ 0.54
HSPG2-201ENST00000374673 DACT2Q5SW24 774 aa18.43■□□□□ 0.54
HSPG2-201ENST00000374673 L3MBTL3Q96JM7 780 aaPredicted RBP18.43■□□□□ 0.54
HSPG2-201ENST00000374673 IQSEC3Q9UPP2 1182 aaPredicted RBP18.43■□□□□ 0.54
HSPG2-201ENST00000374673 COL1A1P02452 1464 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms