RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 JAK2O60674 1132 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 MAGEB6Q8N7X4 407 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
HERC4-202ENST00000373700 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.953e-7■■■□□ 16.3
HERC4-202ENST00000373700 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 USP5P45974 858 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 CRKLP46109 303 aaKnown RBP9.1□□□□□ -0.95
HERC4-202ENST00000373700 CCAR1Q8IX12 1150 aaKnown RBP9.1□□□□□ -0.95
HERC4-202ENST00000373700 C17orf53Q8N3J3 647 aaPredicted RBP9.1□□□□□ -0.95
HERC4-202ENST00000373700 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
HERC4-202ENST00000373700 C16orf45Q96MC5 204 aaPredicted RBP9.1□□□□□ -0.95
HERC4-202ENST00000373700 IQSEC2Q5JU85 1478 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
HERC4-202ENST00000373700 CEP57L1Q8IYX8 460 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 GPT2Q8TD30 523 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 TPM2P07951 284 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 ME3Q16798 604 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 ATG3Q9NT62 314 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 HMG20BQ9P0W2 317 aa9.1□□□□□ -0.95
HERC4-202ENST00000373700 MYOM1P52179 1685 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 MARCKSP29966 332 aaPredicted RBP9.09□□□□□ -0.95
HERC4-202ENST00000373700 KIF2CQ99661 725 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 HOOK1Q9UJC3 728 aaKnown RBP9.09□□□□□ -0.95
HERC4-202ENST00000373700 PRDM1O75626 825 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 HMGB1P09429 215 aaKnown RBP9.09□□□□□ -0.95
HERC4-202ENST00000373700 LUZP1Q86V48 1076 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 ERCC4Q92889 916 aaPredicted RBP9.09□□□□□ -0.95
HERC4-202ENST00000373700 TNS3Q68CZ2 1445 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 HEG1Q9ULI3 1381 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 BRD1O95696 1058 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 TPM3P06753 285 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 XBP1P17861 261 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
HERC4-202ENST00000373700 PDE4CQ08493 712 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 MSL1Q68DK7 614 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 KLHL10Q6JEL2 608 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 TPTE2Q6XPS3 522 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 SRP68Q9UHB9 627 aaKnown RBP9.09□□□□□ -0.95
HERC4-202ENST00000373700 SLC4A4Q9Y6R1 1079 aa9.09□□□□□ -0.95
HERC4-202ENST00000373700 ADCY9O60503 1353 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 KIF24Q5T7B8 1368 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 HMGN5P82970 282 aaKnown RBP9.08□□□□□ -0.96
HERC4-202ENST00000373700 USPL1Q5W0Q7 1092 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 CLIP2Q9UDT6 1046 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 PDE8AO60658 829 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 TMEM67Q5HYA8 995 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 ZNF589Q86UQ0 364 aaPredicted RBP9.08□□□□□ -0.96
HERC4-202ENST00000373700 GOLGA8AA7E2F4 631 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 RNF113AO15541 343 aaKnown RBP9.08□□□□□ -0.96
HERC4-202ENST00000373700 GYG1P46976 350 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 MKNK2Q9HBH9 465 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
HERC4-202ENST00000373700 FER1L4A9Z1Z3 1794 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 PTPDC1A2A3K4 754 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 PRC1O43663 620 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 TRIM37O94972 964 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 MBD4O95243 580 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 CFAP100Q494V2 611 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 TRAPPC3LQ5T215 181 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 CCDC186Q7Z3E2 898 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 SLC26A6Q9BXS9 759 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 ARMT1Q9H993 441 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 TPCN1Q9ULQ1 816 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 COL3A1P02461 1466 aaPredicted RBP9.07□□□□□ -0.96
HERC4-202ENST00000373700 RPS6KB1P23443 525 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 MCM5P33992 734 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 BCAMP50895 628 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
HERC4-202ENST00000373700 NCOA7Q8NI08 942 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 MYL10Q9BUA6 226 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 LARGE1O95461 756 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 TPM1P09493 284 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 PHKA1P46020 1223 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 CTSWP56202 376 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 TSR1Q2NL82 804 aaKnown RBP9.07□□□□□ -0.96
HERC4-202ENST00000373700 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
HERC4-202ENST00000373700 KBTBD3Q8NAB2 608 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
HERC4-202ENST00000373700 DDX19AQ9NUU7 478 aaKnown RBP9.07□□□□□ -0.96
HERC4-202ENST00000373700 MAP3K15Q6ZN16 1313 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 MPHOSPH10O00566 681 aaKnown RBP9.06□□□□□ -0.96
HERC4-202ENST00000373700 CDKL5O76039 1030 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 IARSP41252 1262 aaKnown RBP9.06□□□□□ -0.96
HERC4-202ENST00000373700 METAP2P50579 478 aaKnown RBP eCLIP9.06□□□□□ -0.96
HERC4-202ENST00000373700 TYRO3Q06418 890 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 ZBTB38Q8NAP3 1195 aaPredicted RBP9.06□□□□□ -0.96
HERC4-202ENST00000373700 MNS1Q8NEH6 495 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 TMX1Q9H3N1 280 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 VAT1LQ9HCJ6 419 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 STAP2Q9UGK3 403 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 ZKSCAN5Q9Y2L8 839 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 B4E1Z4 1266 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 GPAA1O43292 621 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 CCDC112Q8NEF3 446 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms