RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 KLHL34Q8N239 644 aa20.69■□□□□ 0.9
VPS26A-202ENST00000373382 DDX21Q9NR30 783 aaKnown RBP eCLIP20.69■□□□□ 0.9
VPS26A-202ENST00000373382 NEURL1BA8MQ27 555 aa20.69■□□□□ 0.9
VPS26A-202ENST00000373382 GCKRQ14397 625 aa20.69■□□□□ 0.9
VPS26A-202ENST00000373382 ARHGAP29Q52LW3 1261 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 CLIC4Q9Y696 253 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 PFKFB2O60825 505 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 NRDCO43847 1150 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 ATP5JP18859 108 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 MARCKSP29966 332 aaPredicted RBP20.68■□□□□ 0.9
VPS26A-202ENST00000373382 HSP90AB3PQ58FF7 597 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 E4F1Q66K89 784 aaPredicted RBP20.68■□□□□ 0.9
VPS26A-202ENST00000373382 BBXQ8WY36 941 aaPredicted RBP20.68■□□□□ 0.9
VPS26A-202ENST00000373382 ZNF609O15014 1411 aa20.68■□□□□ 0.9
VPS26A-202ENST00000373382 PPP1R13BQ96KQ4 1090 aa20.67■□□□□ 0.9
VPS26A-202ENST00000373382 A0A087WZG4 1122 aa20.67■□□□□ 0.9
VPS26A-202ENST00000373382 NBPF11Q86T75 865 aa20.67■□□□□ 0.9
VPS26A-202ENST00000373382 STK11IPQ8N1F8 1099 aa20.67■□□□□ 0.9
VPS26A-202ENST00000373382 URI1O94763 535 aaPredicted RBP20.66■□□□□ 0.9
VPS26A-202ENST00000373382 GSDMDP57764 484 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 TSGA10IPQ3SY00 556 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 SNRKQ9NRH2 765 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
VPS26A-202ENST00000373382 CDK11BP21127 795 aaKnown RBP20.66■□□□□ 0.9
VPS26A-202ENST00000373382 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 NAA16Q6N069 864 aaPredicted RBP20.66■□□□□ 0.9
VPS26A-202ENST00000373382 ARMCX5Q6P1M9 558 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 PTPN12Q05209 780 aaKnown RBP20.66■□□□□ 0.9
VPS26A-202ENST00000373382 ENGASEQ8NFI3 743 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 SMARCC2Q8TAQ2 1214 aa20.66■□□□□ 0.9
VPS26A-202ENST00000373382 MNS1Q8NEH6 495 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 ALDH8A1Q9H2A2 487 aaPredicted RBP20.65■□□□□ 0.9
VPS26A-202ENST00000373382 EPC1Q9H2F5 836 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 ATP1A3P13637 1013 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
VPS26A-202ENST00000373382 GNL2Q13823 731 aaKnown RBP20.65■□□□□ 0.9
VPS26A-202ENST00000373382 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 SYNE3Q6ZMZ3 975 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 NFATC2IPQ8NCF5 419 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 E7EWF7 191 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 CPLX1O14810 134 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 SERPINC1P01008 464 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 TPM4P67936 248 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 ANKRD13DQ6ZTN6 518 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 C8orf76Q96K31 380 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 NOL10Q9BSC4 688 aaKnown RBP20.65■□□□□ 0.9
VPS26A-202ENST00000373382 KIAA1468Q9P260 1216 aa20.65■□□□□ 0.9
VPS26A-202ENST00000373382 PDIA3P30101 505 aaKnown RBP20.64■□□□□ 0.89
VPS26A-202ENST00000373382 WASHC4Q2M389 1173 aa20.64■□□□□ 0.89
VPS26A-202ENST00000373382 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.89
VPS26A-202ENST00000373382 VGLL3A8MV65 326 aa20.64■□□□□ 0.89
VPS26A-202ENST00000373382 ANKRD24Q8TF21 1146 aa20.64■□□□□ 0.89
VPS26A-202ENST00000373382 UBXN4Q92575 508 aa20.64■□□□□ 0.89
VPS26A-202ENST00000373382 FMN2Q9NZ56 1722 aa20.64■□□□□ 0.89
VPS26A-202ENST00000373382 CFAP100Q494V2 611 aa20.63■□□□□ 0.89
VPS26A-202ENST00000373382 AMOTQ4VCS5 1084 aa20.63■□□□□ 0.89
VPS26A-202ENST00000373382 CACNA1FO60840 1977 aa20.63■□□□□ 0.89
VPS26A-202ENST00000373382 FMR1NBQ8N0W7 255 aaPredicted RBP20.63■□□□□ 0.89
VPS26A-202ENST00000373382 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
VPS26A-202ENST00000373382 CLCN6P51797 869 aa20.63■□□□□ 0.89
VPS26A-202ENST00000373382 PDIA6Q15084 440 aa20.63■□□□□ 0.89
VPS26A-202ENST00000373382 LLPHQ9BRT6 129 aaKnown RBP20.63■□□□□ 0.89
VPS26A-202ENST00000373382 CCDC66A2RUB6 948 aa20.62■□□□□ 0.89
VPS26A-202ENST00000373382 PDILTQ8N807 584 aa20.62■□□□□ 0.89
VPS26A-202ENST00000373382 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
VPS26A-202ENST00000373382 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
VPS26A-202ENST00000373382 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
VPS26A-202ENST00000373382 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
VPS26A-202ENST00000373382 HMGB1P09429 215 aaKnown RBP20.62■□□□□ 0.89
VPS26A-202ENST00000373382 ZC3H6P61129 1189 aaKnown RBP20.62■□□□□ 0.89
VPS26A-202ENST00000373382 BMS1Q14692 1282 aaKnown RBP20.62■□□□□ 0.89
VPS26A-202ENST00000373382 ORC3Q9UBD5 711 aaPredicted RBP20.62■□□□□ 0.89
VPS26A-202ENST00000373382 NWD1Q149M9 1564 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 SPTLC2O15270 562 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 SEC31AO94979 1220 aaKnown RBP20.61■□□□□ 0.89
VPS26A-202ENST00000373382 ZNF202O95125 648 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 HAUS7Q99871 368 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 DIP2BQ9P265 1576 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 HSPD1P10809 573 aaKnown RBP20.61■□□□□ 0.89
VPS26A-202ENST00000373382 RXRAP19793 462 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 ZNF790Q6PG37 636 aa20.61■□□□□ 0.89
VPS26A-202ENST00000373382 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
VPS26A-202ENST00000373382 METTL22Q9BUU2 404 aaPredicted RBP20.61■□□□□ 0.89
VPS26A-202ENST00000373382 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.61■□□□□ 0.892e-6■■□□□ 12
VPS26A-202ENST00000373382 GOLGA8BA8MQT2 603 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 KIF2AO00139 706 aaPredicted RBP20.6■□□□□ 0.89
VPS26A-202ENST00000373382 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 RGPD8O14715 1765 aaPredicted RBP20.6■□□□□ 0.89
VPS26A-202ENST00000373382 CARMIL3Q8ND23 1372 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 FANCCQ00597 558 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
VPS26A-202ENST00000373382 CARD6Q9BX69 1037 aa20.6■□□□□ 0.89
VPS26A-202ENST00000373382 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
VPS26A-202ENST00000373382 ERBB3P21860 1342 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms