RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 CNNM1Q9NRU3 951 aa28.51■■■□□ 2.15
COL9A2-201ENST00000372736 PGAP2Q9UHJ9 254 aa28.51■■■□□ 2.15
COL9A2-201ENST00000372736 TRPM7Q96QT4 1865 aa28.51■■■□□ 2.15
COL9A2-201ENST00000372736 USP17L3A6NCW0 530 aa28.5■■■□□ 2.15
COL9A2-201ENST00000372736 USP17L4A6NCW7 530 aa28.5■■■□□ 2.15
COL9A2-201ENST00000372736 EGFRP00533 1210 aa28.5■■■□□ 2.15
COL9A2-201ENST00000372736 C15orf52Q6ZUT6 534 aaKnown RBP28.5■■■□□ 2.15
COL9A2-201ENST00000372736 USP17L1Q7RTZ2 530 aa28.5■■■□□ 2.15
COL9A2-201ENST00000372736 SAMD7Q7Z3H4 446 aa28.5■■■□□ 2.15
COL9A2-201ENST00000372736 GMLQ99445 158 aa28.5■■■□□ 2.15
COL9A2-201ENST00000372736 PUS3Q9BZE2 481 aaKnown RBP28.5■■■□□ 2.15
COL9A2-201ENST00000372736 AGBL3Q8NEM8 1001 aa28.49■■■□□ 2.15
COL9A2-201ENST00000372736 ZC3H15Q8WU90 426 aaKnown RBP28.49■■■□□ 2.15
COL9A2-201ENST00000372736 TMEM88BA6NKF7 163 aa28.48■■■□□ 2.15
COL9A2-201ENST00000372736 BCAR3O75815 825 aa28.48■■■□□ 2.15
COL9A2-201ENST00000372736 TBC1D10BQ4KMP7 808 aaPredicted RBP28.48■■■□□ 2.15
COL9A2-201ENST00000372736 FMR1Q06787 632 aaKnown RBP eCLIP28.47■■■□□ 2.15
COL9A2-201ENST00000372736 DACT2Q5SW24 774 aa28.47■■■□□ 2.15
COL9A2-201ENST00000372736 TRAF5O00463 557 aa28.46■■■□□ 2.15
COL9A2-201ENST00000372736 ZNF280AP59817 542 aaPredicted RBP28.46■■■□□ 2.15
COL9A2-201ENST00000372736 JMYQ8N9B5 988 aa28.46■■■□□ 2.15
COL9A2-201ENST00000372736 RIPOR2Q9Y4F9 1068 aa28.46■■■□□ 2.15
COL9A2-201ENST00000372736 PLIN1O60240 522 aa28.45■■■□□ 2.14
COL9A2-201ENST00000372736 UBTFL1P0CB47 393 aaPredicted RBP28.45■■■□□ 2.14
COL9A2-201ENST00000372736 TRIM27P14373 513 aa28.45■■■□□ 2.14
COL9A2-201ENST00000372736 KIF4BQ2VIQ3 1234 aa28.45■■■□□ 2.14
COL9A2-201ENST00000372736 INTS3Q68E01 1043 aaKnown RBP28.45■■■□□ 2.14
COL9A2-201ENST00000372736 STRIP1Q5VSL9 837 aa28.44■■■□□ 2.14
COL9A2-201ENST00000372736 MXD3Q9BW11 206 aa28.44■■■□□ 2.14
COL9A2-201ENST00000372736 GLIS2Q9BZE0 524 aaPredicted RBP28.44■■■□□ 2.14
COL9A2-201ENST00000372736 CD209Q9NNX6 404 aa28.44■■■□□ 2.14
COL9A2-201ENST00000372736 TNNQ9UQP3 1299 aa28.44■■■□□ 2.14
COL9A2-201ENST00000372736 MROH5Q6ZUA9 1318 aa28.43■■■□□ 2.14
COL9A2-201ENST00000372736 CNTNAP1P78357 1384 aa28.43■■■□□ 2.14
COL9A2-201ENST00000372736 LRRC24Q50LG9 513 aa28.43■■■□□ 2.14
COL9A2-201ENST00000372736 ATF7IPQ6VMQ6 1270 aa28.43■■■□□ 2.14
COL9A2-201ENST00000372736 KLHDC4Q8TBB5 520 aa28.43■■■□□ 2.14
COL9A2-201ENST00000372736 MEIS3Q99687 375 aa28.43■■■□□ 2.14
COL9A2-201ENST00000372736 IPO8O15397 1037 aaKnown RBP28.42■■■□□ 2.14
COL9A2-201ENST00000372736 USP17L8P0C7I0 530 aa28.42■■■□□ 2.14
COL9A2-201ENST00000372736 RFX5P48382 616 aaPredicted RBP28.42■■■□□ 2.14
COL9A2-201ENST00000372736 RBM26Q5T8P6 1007 aaKnown RBP28.42■■■□□ 2.14
COL9A2-201ENST00000372736 FRAT1Q92837 279 aaPredicted RBP28.42■■■□□ 2.14
COL9A2-201ENST00000372736 FBXW7Q969H0 707 aa28.42■■■□□ 2.14
COL9A2-201ENST00000372736 PCNTO95613 3336 aa28.42■■■□□ 2.14
COL9A2-201ENST00000372736 POLR2AP24928 1970 aaKnown RBP28.42■■■□□ 2.14
COL9A2-201ENST00000372736 MYO3BQ8WXR4 1341 aa28.42■■■□□ 2.14
COL9A2-201ENST00000372736 UBE4AQ14139 1066 aa28.41■■■□□ 2.14
COL9A2-201ENST00000372736 ZNF804AQ7Z570 1209 aa28.41■■■□□ 2.14
COL9A2-201ENST00000372736 MKRN1Q9UHC7 482 aaKnown RBP28.41■■■□□ 2.14
COL9A2-201ENST00000372736 TTLL5Q6EMB2 1281 aa28.4■■■□□ 2.14
COL9A2-201ENST00000372736 VGLL2Q8N8G2 317 aa28.4■■■□□ 2.14
COL9A2-201ENST00000372736 LRRFIP2Q9Y608 721 aaKnown RBP28.4■■■□□ 2.14
COL9A2-201ENST00000372736 IL1R1P14778 569 aa28.39■■■□□ 2.14
COL9A2-201ENST00000372736 GTF2IP78347 998 aa28.39■■■□□ 2.14
COL9A2-201ENST00000372736 CST9Q5W186 159 aa28.39■■■□□ 2.14
COL9A2-201ENST00000372736 CDC37L1Q7L3B6 337 aa28.39■■■□□ 2.14
COL9A2-201ENST00000372736 MYOZ2Q9NPC6 264 aa28.38■■■□□ 2.13
COL9A2-201ENST00000372736 ASTN2O75129 1339 aaPredicted RBP28.38■■■□□ 2.13
COL9A2-201ENST00000372736 PTPN12Q05209 780 aaKnown RBP28.37■■■□□ 2.13
COL9A2-201ENST00000372736 METTL24Q5JXM2 366 aa28.37■■■□□ 2.13
COL9A2-201ENST00000372736 GGA3Q9NZ52 723 aa28.37■■■□□ 2.13
COL9A2-201ENST00000372736 RASSF10A6NK89 507 aa28.36■■■□□ 2.13
COL9A2-201ENST00000372736 USP48Q86UV5 1035 aa28.36■■■□□ 2.13
COL9A2-201ENST00000372736 CLUAP1Q96AJ1 413 aa28.36■■■□□ 2.13
COL9A2-201ENST00000372736 HDAC5Q9UQL6 1122 aa28.36■■■□□ 2.13
COL9A2-201ENST00000372736 ARAP2Q8WZ64 1704 aa28.35■■■□□ 2.13
COL9A2-201ENST00000372736 ZKSCAN2Q63HK3 967 aa28.35■■■□□ 2.13
COL9A2-201ENST00000372736 KRT26Q7Z3Y9 468 aa28.35■■■□□ 2.13
COL9A2-201ENST00000372736 ABT1Q9ULW3 272 aaKnown RBP28.35■■■□□ 2.13
COL9A2-201ENST00000372736 EYA2O00167 538 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 PDE8BO95263 885 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 CELF2O95319 508 aaKnown RBP28.34■■■□□ 2.13
COL9A2-201ENST00000372736 GNAI3P08754 354 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 GYG1P46976 350 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 SCARF1Q14162 830 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 DLK2Q6UY11 383 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 CERS5Q8N5B7 392 aa28.34■■■□□ 2.13
COL9A2-201ENST00000372736 DCPSQ96C86 337 aaKnown RBP28.34■■■□□ 2.13
COL9A2-201ENST00000372736 FAM84BQ96KN1 310 aaPredicted RBP28.34■■■□□ 2.13
COL9A2-201ENST00000372736 ADM5C9JUS6 153 aa28.33■■■□□ 2.13
COL9A2-201ENST00000372736 ATG9AQ7Z3C6 839 aa28.33■■■□□ 2.13
COL9A2-201ENST00000372736 KIAA0825Q8IV33 1275 aa28.33■■■□□ 2.13
COL9A2-201ENST00000372736 OGFOD1Q8N543 542 aa28.33■■■□□ 2.13
COL9A2-201ENST00000372736 TDRD7Q8NHU6 1098 aaKnown RBP28.32■■■□□ 2.12
COL9A2-201ENST00000372736 HIBADHP31937 336 aaKnown RBP28.31■■■□□ 2.12
COL9A2-201ENST00000372736 VEGFBP49765 207 aa28.31■■■□□ 2.12
COL9A2-201ENST00000372736 MMP14P50281 582 aa28.31■■■□□ 2.12
COL9A2-201ENST00000372736 ANGEL2Q5VTE6 544 aaKnown RBP28.31■■■□□ 2.12
COL9A2-201ENST00000372736 TMEM57Q8N5G2 664 aa28.31■■■□□ 2.12
COL9A2-201ENST00000372736 JAG2Q9Y219 1238 aa28.31■■■□□ 2.12
COL9A2-201ENST00000372736 TLL2Q9Y6L7 1015 aa28.31■■■□□ 2.12
COL9A2-201ENST00000372736 THSD7BQ9C0I4 1608 aa28.3■■■□□ 2.12
COL9A2-201ENST00000372736 PITPNM2Q9BZ72 1349 aa28.3■■■□□ 2.12
COL9A2-201ENST00000372736 FGFR2P21802 821 aa28.3■■■□□ 2.12
COL9A2-201ENST00000372736 FKBP1AP62942 108 aaKnown RBP28.3■■■□□ 2.12
COL9A2-201ENST00000372736 PUM3Q15397 648 aaKnown RBP28.3■■■□□ 2.12
COL9A2-201ENST00000372736 DEFB115Q30KQ5 88 aa28.3■■■□□ 2.12
COL9A2-201ENST00000372736 SIL1Q9H173 461 aa28.3■■■□□ 2.12
COL9A2-201ENST00000372736 ZNF408Q9H9D4 720 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms