RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 NTSR2O95665 410 aa21.28■■□□□ 1
CTSA-204ENST00000372484 PUM3Q15397 648 aaKnown RBP21.28■■□□□ 1
CTSA-204ENST00000372484 ZNF512BQ96KM6 892 aaPredicted RBP21.28■■□□□ 1
CTSA-204ENST00000372484 MPHOSPH8Q99549 860 aa21.28■■□□□ 1
CTSA-204ENST00000372484 USP21Q9UK80 565 aa21.28■■□□□ 1
CTSA-204ENST00000372484 TCHHQ07283 1943 aa21.28■■□□□ 1
CTSA-204ENST00000372484 XRCC6P12956 609 aaKnown RBP eCLIP21.28■■□□□ 1
CTSA-204ENST00000372484 MRE11P49959 708 aa21.28■■□□□ 1
CTSA-204ENST00000372484 CCDC152Q4G0S7 254 aa21.28■■□□□ 1
CTSA-204ENST00000372484 CAVIN1Q6NZI2 390 aaKnown RBP21.28■■□□□ 1
CTSA-204ENST00000372484 HELBQ8NG08 1087 aaPredicted RBP21.28■■□□□ 1
CTSA-204ENST00000372484 BCORQ6W2J9 1755 aa21.27■■□□□ 1
CTSA-204ENST00000372484 KCNQ4P56696 695 aa21.27■■□□□ 1
CTSA-204ENST00000372484 GPT2Q8TD30 523 aa21.27■■□□□ 1
CTSA-204ENST00000372484 LPIN2Q92539 896 aa21.27■■□□□ 1
CTSA-204ENST00000372484 SEC31BQ9NQW1 1179 aa21.27■■□□□ 1
CTSA-204ENST00000372484 LAMA4Q16363 1823 aa21.27■■□□□ 1
CTSA-204ENST00000372484 DTNBO60941 627 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 HMGB1P09429 215 aaKnown RBP21.26■□□□□ 0.99
CTSA-204ENST00000372484 STOX1Q6ZVD7 989 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.26■□□□□ 0.993e-6■■□□□ 12.8
CTSA-204ENST00000372484 CCDC102BQ68D86 513 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 CLEC4GQ6UXB4 293 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 Q6ZUG5 572 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 APPBP2Q92624 585 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 LAMB2P55268 1798 aa21.26■□□□□ 0.99
CTSA-204ENST00000372484 SPATA31A6Q5VVP1 1343 aa21.25■□□□□ 0.99
CTSA-204ENST00000372484 PTF1AQ7RTS3 328 aa21.25■□□□□ 0.99
CTSA-204ENST00000372484 GAS2L3Q86XJ1 694 aa21.25■□□□□ 0.99
CTSA-204ENST00000372484 GRPEL1Q9HAV7 217 aa21.25■□□□□ 0.99
CTSA-204ENST00000372484 PHKA1P46020 1223 aa21.25■□□□□ 0.99
CTSA-204ENST00000372484 STK3Q13188 491 aa21.25■□□□□ 0.99
CTSA-204ENST00000372484 TTF1Q15361 905 aaPredicted RBP21.25■□□□□ 0.99
CTSA-204ENST00000372484 F13A1P00488 732 aa21.24■□□□□ 0.99
CTSA-204ENST00000372484 FGFR2P21802 821 aa21.24■□□□□ 0.99
CTSA-204ENST00000372484 FGD1P98174 961 aa21.24■□□□□ 0.99
CTSA-204ENST00000372484 ATP6V1DQ9Y5K8 247 aa21.24■□□□□ 0.99
CTSA-204ENST00000372484 ARAP2Q8WZ64 1704 aa21.24■□□□□ 0.99
CTSA-204ENST00000372484 UQCRFS1P1P0C7P4 283 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 SLC5A1P13866 664 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 ARID4AP29374 1257 aaPredicted RBP21.23■□□□□ 0.99
CTSA-204ENST00000372484 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
CTSA-204ENST00000372484 ZSCAN25Q6NSZ9 544 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
CTSA-204ENST00000372484 PUS7LQ9H0K6 701 aaKnown RBP21.23■□□□□ 0.99
CTSA-204ENST00000372484 RTL9Q8NET4 1388 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 CNTNAP4Q9C0A0 1308 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 A0A0G2JLW4 131 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 MBD3O95983 291 aa21.23■□□□□ 0.99
CTSA-204ENST00000372484 MYO5AQ9Y4I1 1855 aaKnown RBP21.22■□□□□ 0.99
CTSA-204ENST00000372484 E7EWF7 191 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 ZSCAN23Q3MJ62 389 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 GDPD2Q9HCC8 539 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 CTNNA3Q9UI47 895 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 MTMR6Q9Y217 621 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 BTAF1O14981 1849 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 SLC9C2Q5TAH2 1124 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 LARP1BQ659C4 914 aaKnown RBP21.22■□□□□ 0.99
CTSA-204ENST00000372484 TTLL5Q6EMB2 1281 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 BRF1Q92994 677 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 LRRC2Q9BYS8 371 aa21.22■□□□□ 0.99
CTSA-204ENST00000372484 VPS37CA5D8V6 355 aaPredicted RBP21.21■□□□□ 0.99
CTSA-204ENST00000372484 PDIA4P13667 645 aaKnown RBP21.21■□□□□ 0.99
CTSA-204ENST00000372484 THSD7AQ9UPZ6 1657 aa21.21■□□□□ 0.99
CTSA-204ENST00000372484 FOXP2O15409 715 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 GPAA1O43292 621 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 IDH1O75874 414 aaKnown RBP21.2■□□□□ 0.98
CTSA-204ENST00000372484 PDCP20941 246 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 ADD2P35612 726 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 USP48Q86UV5 1035 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 GTF3C6Q969F1 213 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 PANK2Q9BZ23 570 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 PIH1D3Q9NQM4 214 aaKnown RBP21.2■□□□□ 0.98
CTSA-204ENST00000372484 NSFL1CQ9UNZ2 370 aaKnown RBP21.2■□□□□ 0.98
CTSA-204ENST00000372484 SNAP23O00161 211 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 FAM182BQ5T319 152 aa21.2■□□□□ 0.98
CTSA-204ENST00000372484 RBM27Q9P2N5 1060 aaKnown RBP21.2■□□□□ 0.98
CTSA-204ENST00000372484 ZNF445P59923 1031 aa21.19■□□□□ 0.98
CTSA-204ENST00000372484 EXOSC10Q01780 885 aaKnown RBP21.19■□□□□ 0.98
CTSA-204ENST00000372484 IMMTQ16891 758 aaKnown RBP21.19■□□□□ 0.98
CTSA-204ENST00000372484 ERFEQ4G0M1 354 aa21.19■□□□□ 0.98
CTSA-204ENST00000372484 CNPY2Q9Y2B0 182 aa21.19■□□□□ 0.98
CTSA-204ENST00000372484 FGAP02671 866 aa21.19■□□□□ 0.98
CTSA-204ENST00000372484 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
CTSA-204ENST00000372484 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
CTSA-204ENST00000372484 MEX3CQ5U5Q3 659 aaKnown RBP21.18■□□□□ 0.98
CTSA-204ENST00000372484 SMIM5Q71RC9 77 aa21.18■□□□□ 0.98
CTSA-204ENST00000372484 SPATA5Q8NB90 893 aa21.18■□□□□ 0.98
CTSA-204ENST00000372484 CDC5LQ99459 802 aaKnown RBP21.18■□□□□ 0.98
CTSA-204ENST00000372484 UBE3CQ15386 1083 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
CTSA-204ENST00000372484 TMEM87AQ8NBN3 555 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 TMEM63CQ9P1W3 806 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 SCN7AQ01118 1682 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 HAND2P61296 217 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 CHRNDQ07001 517 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 ATRNO75882 1429 aa21.17■□□□□ 0.98
CTSA-204ENST00000372484 RGL2O15211 777 aa21.16■□□□□ 0.98
CTSA-204ENST00000372484 GADD45BO75293 160 aaPredicted RBP21.16■□□□□ 0.98
CTSA-204ENST00000372484 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms