RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 MTFR1Q15390 333 aa10.54□□□□□ -0.72
YIPF3-201ENST00000372417 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
YIPF3-201ENST00000372417 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
YIPF3-201ENST00000372417 RPTORQ8N122 1335 aa10.54□□□□□ -0.72
YIPF3-201ENST00000372417 WNT10BO00744 389 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 FARP2O94887 1054 aaPredicted RBP10.53□□□□□ -0.72
YIPF3-201ENST00000372417 BMP8BP34820 402 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 GJA8P48165 433 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 MAP3K11Q16584 847 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 LRIT3Q3SXY7 679 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 MCM10Q7L590 875 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 RTF1Q92541 710 aaKnown RBP10.53□□□□□ -0.72
YIPF3-201ENST00000372417 CELF1Q92879 486 aaKnown RBP10.53□□□□□ -0.72
YIPF3-201ENST00000372417 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 PTPN18Q99952 460 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 SH3TC1Q8TE82 1336 aa10.53□□□□□ -0.72
YIPF3-201ENST00000372417 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
YIPF3-201ENST00000372417 KIF22Q14807 665 aa10.52□□□□□ -0.73
YIPF3-201ENST00000372417 TAF1CQ15572 869 aaPredicted RBP10.52□□□□□ -0.73
YIPF3-201ENST00000372417 FAM122AQ96E09 287 aa10.52□□□□□ -0.73
YIPF3-201ENST00000372417 ZFYVE28Q9HCC9 887 aa10.52□□□□□ -0.73
YIPF3-201ENST00000372417 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
YIPF3-201ENST00000372417 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
YIPF3-201ENST00000372417 UFL1O94874 794 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 SASH1O94885 1247 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 GJB1P08034 283 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 GJA5P36382 358 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 BCAMP50895 628 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 PRMT2P55345 433 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 OGFOD1Q8N543 542 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 GDF15Q99988 308 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 RAPGEFL1Q9UHV5 662 aa10.51□□□□□ -0.73
YIPF3-201ENST00000372417 TRMT112Q9UI30 125 aaKnown RBP10.51□□□□□ -0.73
YIPF3-201ENST00000372417 MYH3P11055 1940 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 GNRH1P01148 92 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 CCL5P13501 91 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 NLRP10Q86W26 655 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 GGA1Q9UJY5 639 aa10.5□□□□□ -0.73
YIPF3-201ENST00000372417 PRKAR2BP31323 418 aa10.49□□□□□ -0.73
YIPF3-201ENST00000372417 LACTBP83111 547 aaPredicted RBP10.49□□□□□ -0.73
YIPF3-201ENST00000372417 TAF7Q15545 349 aaPredicted RBP10.49□□□□□ -0.73
YIPF3-201ENST00000372417 SYMPKQ92797 1274 aaKnown RBP10.49□□□□□ -0.73
YIPF3-201ENST00000372417 RNF208Q9H0X6 261 aa10.49□□□□□ -0.73
YIPF3-201ENST00000372417 ANKIB1Q9P2G1 1089 aa10.49□□□□□ -0.73
YIPF3-201ENST00000372417 DDX60LQ5H9U9 1706 aaKnown RBP10.48□□□□□ -0.73
YIPF3-201ENST00000372417 ARAP2Q8WZ64 1704 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
YIPF3-201ENST00000372417 IREB2P48200 963 aaKnown RBP10.48□□□□□ -0.73
YIPF3-201ENST00000372417 DCTN1Q14203 1278 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 PODNQ7Z5L7 613 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 U2AF1L4Q8WU68 220 aaKnown RBP10.48□□□□□ -0.73
YIPF3-201ENST00000372417 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 MYO3BQ8WXR4 1341 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 IRS2Q9Y4H2 1338 aa10.48□□□□□ -0.73
YIPF3-201ENST00000372417 NCOR1O75376 2440 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 DOCK3Q8IZD9 2030 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
YIPF3-201ENST00000372417 GRK4P32298 578 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 MMP14P50281 582 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 UBXN2AP68543 259 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
YIPF3-201ENST00000372417 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
YIPF3-201ENST00000372417 ANKRD13AQ8IZ07 590 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 RAET1EQ8TD07 263 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 OPTNQ96CV9 577 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 DEFB129Q9H1M3 183 aa10.47□□□□□ -0.73
YIPF3-201ENST00000372417 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
YIPF3-201ENST00000372417 CCL15-CCL14A0A0B4J2E2 113 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 RPS8P62241 208 aaKnown RBP10.46□□□□□ -0.73
YIPF3-201ENST00000372417 CCL15Q16663 113 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 BRI3BPQ8WY22 251 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 TRIM47Q96LD4 638 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 THUMPD2Q9BTF0 503 aaKnown RBP10.46□□□□□ -0.73
YIPF3-201ENST00000372417 MXD3Q9BW11 206 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 SRRDQ9UH36 339 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 RIPOR2Q9Y4F9 1068 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 PPP2R3BQ9Y5P8 575 aa10.46□□□□□ -0.73
YIPF3-201ENST00000372417 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
YIPF3-201ENST00000372417 TLR2O60603 784 aa10.45□□□□□ -0.74
YIPF3-201ENST00000372417 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
YIPF3-201ENST00000372417 SGPL1O95470 568 aa10.45□□□□□ -0.74
YIPF3-201ENST00000372417 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
YIPF3-201ENST00000372417 SUPT20HL1Q3ZLR7 823 aa10.45□□□□□ -0.74
YIPF3-201ENST00000372417 DACT2Q5SW24 774 aa10.45□□□□□ -0.74
YIPF3-201ENST00000372417 C7orf61Q8IZ16 206 aa10.45□□□□□ -0.74
YIPF3-201ENST00000372417 FAM43AQ8N2R8 423 aa10.45□□□□□ -0.74
YIPF3-201ENST00000372417 PNISRQ8TF01 805 aaKnown RBP10.45□□□□□ -0.74
YIPF3-201ENST00000372417 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms