RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 USP17L3A6NCW0 530 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 USP17L4A6NCW7 530 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 H7C1D1 291 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 USP17L1Q7RTZ2 530 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 MICALL2Q8IY33 904 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 GMLQ99445 158 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 PGAP2Q9UHJ9 254 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 PASKQ96RG2 1323 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 HIRAP54198 1017 aaPredicted RBP25.09■■□□□ 1.61
TMEM53-205ENST00000372244 LRRC24Q50LG9 513 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 CNTROBQ8N137 903 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 DNAJC5GQ8N7S2 189 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 AGBL3Q8NEM8 1001 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 CLUAP1Q96AJ1 413 aa25.09■■□□□ 1.61
TMEM53-205ENST00000372244 MROH5Q6ZUA9 1318 aa25.08■■□□□ 1.61
TMEM53-205ENST00000372244 PLIN1O60240 522 aa25.08■■□□□ 1.6
TMEM53-205ENST00000372244 GNAI3P08754 354 aa25.08■■□□□ 1.6
TMEM53-205ENST00000372244 MAP1SQ66K74 1059 aaPredicted RBP25.08■■□□□ 1.6
TMEM53-205ENST00000372244 RSBN1LQ6PCB5 846 aaPredicted RBP25.08■■□□□ 1.6
TMEM53-205ENST00000372244 KLHDC4Q8TBB5 520 aa25.08■■□□□ 1.6
TMEM53-205ENST00000372244 LRRFIP2Q9Y608 721 aaKnown RBP25.08■■□□□ 1.6
TMEM53-205ENST00000372244 PTPN12Q05209 780 aaKnown RBP25.07■■□□□ 1.6
TMEM53-205ENST00000372244 UBE4AQ14139 1066 aa25.07■■□□□ 1.6
TMEM53-205ENST00000372244 ZNF609O15014 1411 aa25.07■■□□□ 1.6
TMEM53-205ENST00000372244 STRIP1Q5VSL9 837 aa25.06■■□□□ 1.6
TMEM53-205ENST00000372244 ZC3H15Q8WU90 426 aaKnown RBP25.06■■□□□ 1.6
TMEM53-205ENST00000372244 CD209Q9NNX6 404 aa25.06■■□□□ 1.6
TMEM53-205ENST00000372244 DACT2Q5SW24 774 aa25.05■■□□□ 1.6
TMEM53-205ENST00000372244 TMEM57Q8N5G2 664 aa25.05■■□□□ 1.6
TMEM53-205ENST00000372244 VGLL2Q8N8G2 317 aa25.05■■□□□ 1.6
TMEM53-205ENST00000372244 TRPM4Q8TD43 1214 aa25.05■■□□□ 1.6
TMEM53-205ENST00000372244 ZNF280AP59817 542 aaPredicted RBP25.04■■□□□ 1.6
TMEM53-205ENST00000372244 HTRA3P83110 453 aa25.04■■□□□ 1.6
TMEM53-205ENST00000372244 SAMD7Q7Z3H4 446 aa25.04■■□□□ 1.6
TMEM53-205ENST00000372244 IL1R1P14778 569 aa25.03■■□□□ 1.6
TMEM53-205ENST00000372244 TTLL5Q6EMB2 1281 aa25.03■■□□□ 1.6
TMEM53-205ENST00000372244 EYA2O00167 538 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 PDE8BO95263 885 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 EGFRP00533 1210 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 FBXO3Q9UK99 471 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 MTX1Q13505 466 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 METTL24Q5JXM2 366 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 ATG9AQ7Z3C6 839 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 ZNF804AQ7Z570 1209 aa25.02■■□□□ 1.6
TMEM53-205ENST00000372244 DZIP1LQ8IYY4 767 aaKnown RBP25.02■■□□□ 1.6
TMEM53-205ENST00000372244 USP17L8P0C7I0 530 aa25.01■■□□□ 1.59
TMEM53-205ENST00000372244 RLBP1P12271 317 aa25.01■■□□□ 1.59
TMEM53-205ENST00000372244 TBC1D10BQ4KMP7 808 aaPredicted RBP25.01■■□□□ 1.59
TMEM53-205ENST00000372244 FAM84BQ96KN1 310 aaPredicted RBP25.01■■□□□ 1.59
TMEM53-205ENST00000372244 CIAO1O76071 339 aa25■■□□□ 1.59
TMEM53-205ENST00000372244 MXD3Q9BW11 206 aa25■■□□□ 1.59
TMEM53-205ENST00000372244 COPRSQ9NQ92 184 aa25■■□□□ 1.59
TMEM53-205ENST00000372244 CREBZFQ9NS37 354 aa25■■□□□ 1.59
TMEM53-205ENST00000372244 GNAI2P04899 355 aa24.99■■□□□ 1.59
TMEM53-205ENST00000372244 GTF2IP78347 998 aa24.99■■□□□ 1.59
TMEM53-205ENST00000372244 MYO3BQ8WXR4 1341 aa24.99■■□□□ 1.59
TMEM53-205ENST00000372244 PSME4Q14997 1843 aa24.98■■□□□ 1.59
TMEM53-205ENST00000372244 SASH1O94885 1247 aa24.98■■□□□ 1.59
TMEM53-205ENST00000372244 FGFR2P21802 821 aa24.98■■□□□ 1.59
TMEM53-205ENST00000372244 FBXO33Q7Z6M2 555 aa24.98■■□□□ 1.59
TMEM53-205ENST00000372244 FTSJ3Q8IY81 847 aaKnown RBP24.98■■□□□ 1.59
TMEM53-205ENST00000372244 TDRD7Q8NHU6 1098 aaKnown RBP24.98■■□□□ 1.59
TMEM53-205ENST00000372244 A0A1B0GUL6 1792 aa24.98■■□□□ 1.59
TMEM53-205ENST00000372244 HIBADHP31937 336 aaKnown RBP24.97■■□□□ 1.59
TMEM53-205ENST00000372244 MMP14P50281 582 aa24.97■■□□□ 1.59
TMEM53-205ENST00000372244 RBM26Q5T8P6 1007 aaKnown RBP24.97■■□□□ 1.59
TMEM53-205ENST00000372244 ZBTB7BO15156 539 aaPredicted RBP24.96■■□□□ 1.59
TMEM53-205ENST00000372244 GYG1P46976 350 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 KIF4BQ2VIQ3 1234 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 TMEM88BA6NKF7 163 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 SRGAP3O43295 1099 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 FBXW7Q969H0 707 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 MYOZ2Q9NPC6 264 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 RCAN3Q9UKA8 241 aa24.96■■□□□ 1.59
TMEM53-205ENST00000372244 PA2G4Q9UQ80 394 aaKnown RBP24.96■■□□□ 1.59
TMEM53-205ENST00000372244 TRAF5O00463 557 aa24.95■■□□□ 1.58
TMEM53-205ENST00000372244 FMR1Q06787 632 aaKnown RBP eCLIP24.95■■□□□ 1.58
TMEM53-205ENST00000372244 PUM3Q15397 648 aaKnown RBP24.95■■□□□ 1.58
TMEM53-205ENST00000372244 CDC37L1Q7L3B6 337 aa24.95■■□□□ 1.58
TMEM53-205ENST00000372244 KLRG1Q96E93 195 aa24.95■■□□□ 1.58
TMEM53-205ENST00000372244 SIL1Q9H173 461 aa24.95■■□□□ 1.58
TMEM53-205ENST00000372244 IL15P40933 162 aaPredicted RBP24.94■■□□□ 1.58
TMEM53-205ENST00000372244 FKBP1AP62942 108 aaKnown RBP24.94■■□□□ 1.58
TMEM53-205ENST00000372244 OGFOD1Q8N543 542 aa24.94■■□□□ 1.58
TMEM53-205ENST00000372244 CERS5Q8N5B7 392 aa24.94■■□□□ 1.58
TMEM53-205ENST00000372244 GLIS2Q9BZE0 524 aaPredicted RBP24.94■■□□□ 1.58
TMEM53-205ENST00000372244 FAM205AQ6ZU69 1335 aa24.94■■□□□ 1.58
TMEM53-205ENST00000372244 SCARF1Q14162 830 aa24.93■■□□□ 1.58
TMEM53-205ENST00000372244 CST9Q5W186 159 aa24.93■■□□□ 1.58
TMEM53-205ENST00000372244 ITPRIPQ8IWB1 547 aa24.93■■□□□ 1.58
TMEM53-205ENST00000372244 CEP126Q9P2H0 1117 aa24.93■■□□□ 1.58
TMEM53-205ENST00000372244 CAVIN4Q5BKX8 364 aa24.92■■□□□ 1.58
TMEM53-205ENST00000372244 PANK1Q8TE04 598 aa24.92■■□□□ 1.58
TMEM53-205ENST00000372244 LPIN2Q92539 896 aa24.92■■□□□ 1.58
TMEM53-205ENST00000372244 ZNF646O15015 1829 aaPredicted RBP24.92■■□□□ 1.58
TMEM53-205ENST00000372244 PNMA6EA0A0J9YXQ4 647 aa24.91■■□□□ 1.58
TMEM53-205ENST00000372244 IFIT1P09914 478 aaKnown RBP24.91■■□□□ 1.58
TMEM53-205ENST00000372244 BCAMP50895 628 aa24.91■■□□□ 1.58
TMEM53-205ENST00000372244 KIAA0825Q8IV33 1275 aa24.91■■□□□ 1.58
TMEM53-205ENST00000372244 MS4A1P11836 297 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms