RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 LRRD1A4D1F6 860 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 VSIG1Q86XK7 387 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 SLC8A1P32418 973 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 RRAGBQ5VZM2 374 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 NAPBQ9H115 298 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 MAK16Q9BXY0 300 aaKnown RBP17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 FAM169AQ9Y6X4 670 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 I3L4J1 428 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 ELF2Q15723 593 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 CALCOCO2Q13137 446 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 DNAJC8O75937 253 aaPredicted RBP17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 CCDC26Q8TAB7 109 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 MRRFQ96E11 262 aaKnown RBP17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 USP48Q86UV5 1035 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 CABS1Q96KC9 395 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 IRX4P78413 519 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 WDR78Q5VTH9 848 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 TRMT1LQ7Z2T5 733 aaKnown RBP17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 PIK3R5Q8WYR1 880 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
GTF3C4-201ENST00000372146 SNCBQ16143 134 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 ERO1AQ96HE7 468 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 MYO10Q9HD67 2058 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 Q9H521 79 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 MKNK2Q9HBH9 465 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 INF2Q27J81 1249 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 CCDC42Q96M95 316 aa17.24■□□□□ 0.35
GTF3C4-201ENST00000372146 PDCD2Q16342 344 aaPredicted RBP17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 ATP2A3Q93084 1043 aa17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 PALMDQ9NP74 551 aa17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 UBA7P41226 1012 aa17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 RPSAP08865 295 aaKnown RBP17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 ZSCAN16Q9H4T2 348 aaPredicted RBP17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 GAS8O95995 478 aa17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
GTF3C4-201ENST00000372146 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 SYF2O95926 243 aaKnown RBP17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 NLRP2Q9NX02 1062 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 RIOK3O14730 519 aaKnown RBP17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 HIP1RO75146 1068 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 THEGQ9P2T0 379 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 RANBP6O60518 1105 aaKnown RBP17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 AFAP1L2Q8N4X5 818 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 SEL1L2Q5TEA6 688 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 TYRO3Q06418 890 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 HOMEZQ8IX15 550 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
GTF3C4-201ENST00000372146 IFT20Q8IY31 132 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 USP6NLQ92738 828 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 PHEXP78562 749 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 C8orf74Q6P047 294 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 PDZD8Q8NEN9 1154 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 MYH10P35580 1976 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 PPP2R5AQ15172 486 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 APOEP02649 317 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 ITIH3Q06033 890 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 EHMT1Q9H9B1 1298 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
GTF3C4-201ENST00000372146 IQCA1Q86XH1 822 aa17.21■□□□□ 0.34
GTF3C4-201ENST00000372146 BAG2O95816 211 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 ZNF213O14771 459 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 NUB1Q9Y5A7 615 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 MGARPQ8TDB4 240 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 SPDL1Q96EA4 605 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 RILPQ96NA2 401 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 FAN1Q9Y2M0 1017 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 RASA3Q14644 834 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 BOLA2Q9H3K6 86 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 CLTAP09496 248 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
GTF3C4-201ENST00000372146 MYRIPQ8NFW9 859 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 POLD1P28340 1107 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms