RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 NRDCO43847 1150 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
LRRC40-201ENST00000370952 TXLNBQ8N3L3 684 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
LRRC40-201ENST00000370952 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 SMC1AQ14683 1233 aaKnown RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 STOX1Q6ZVD7 989 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 KRT32Q14532 448 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 ZSCAN26Q16670 478 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 DPF2Q92785 391 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 KAZALD1Q96I82 304 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 RSPH14Q9UHP6 348 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 FANCCQ00597 558 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 NAA16Q6N069 864 aaPredicted RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 CC2D1AQ6P1N0 951 aaPredicted RBP11.22□□□□□ -0.61
LRRC40-201ENST00000370952 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
LRRC40-201ENST00000370952 NEO1Q92859 1461 aa11.21□□□□□ -0.61
LRRC40-201ENST00000370952 ALDH1L1O75891 902 aa11.21□□□□□ -0.61
LRRC40-201ENST00000370952 TEFQ10587 303 aa11.21□□□□□ -0.61
LRRC40-201ENST00000370952 NCAPHQ15003 741 aa11.21□□□□□ -0.61
LRRC40-201ENST00000370952 A0A0G2JLW4 131 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 PFKFB2O60825 505 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.62
LRRC40-201ENST00000370952 NLRP6P59044 892 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 USPL1Q5W0Q7 1092 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.62
LRRC40-201ENST00000370952 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 LAMA4Q16363 1823 aa11.21□□□□□ -0.62
LRRC40-201ENST00000370952 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.2□□□□□ -0.62
LRRC40-201ENST00000370952 EFCAB8A8MWE9 144 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 MYO1CO00159 1063 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 HOXC9P31274 260 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 LMAN1P49257 510 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 STK38Q15208 465 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 LRRFIP1Q32MZ4 808 aaKnown RBP11.2□□□□□ -0.62
LRRC40-201ENST00000370952 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 REXO1L1PQ8IX06 675 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 NEDD4P46934 1319 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 JCADQ9P266 1359 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 SLC3A2P08195 630 aaKnown RBP11.2□□□□□ -0.62
LRRC40-201ENST00000370952 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
LRRC40-201ENST00000370952 GPS2Q13227 327 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 HSP90AA4PQ58FG1 418 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 CCDC158Q5M9N0 1113 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 ZSWIM4Q9H7M6 989 aa11.2□□□□□ -0.62
LRRC40-201ENST00000370952 TMEM232C9JQI7 657 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 ADALQ6DHV7 355 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 WDR24Q96S15 920 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 ZNF609O15014 1411 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 KCNJ6P48051 423 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 NLRP12P59046 1061 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 GNG11P61952 73 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
LRRC40-201ENST00000370952 GJB4Q9NTQ9 266 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
LRRC40-201ENST00000370952 VWA3AA6NCI4 1184 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 H3BQF6 201 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 GRM8O00222 908 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 SERPINC1P01008 464 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 UBASH3AP57075 661 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
LRRC40-201ENST00000370952 PARD6BQ9BYG5 372 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 TOPAZ1Q8N9V7 1692 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 SRRTQ9BXP5 876 aaKnown RBP11.18□□□□□ -0.62
LRRC40-201ENST00000370952 HSD3B7Q9H2F3 369 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 ARFGAP3Q9NP61 516 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
LRRC40-201ENST00000370952 TECPR2O15040 1411 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 ZNF202O95125 648 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 TUBB4AP04350 444 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 PPP2R3AQ06190 1150 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 MPRIPQ6WCQ1 1025 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
LRRC40-201ENST00000370952 SIRT1Q96EB6 747 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 BPIFA3Q9BQP9 254 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 FUT8Q9BYC5 575 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
LRRC40-201ENST00000370952 DBNLQ9UJU6 430 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms