RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 GOLGA1Q92805 767 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 SETDB1Q15047 1291 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 CFAP157Q5JU67 520 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 TCEANC2Q96MN5 208 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 PPFIBP2Q8ND30 876 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 IFT81Q8WYA0 676 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 LRRC2Q9BYS8 371 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
PRDM1-203ENST00000369096 ODF2LQ9ULJ1 636 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 SNX16P57768 344 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 LMOD1P29536 600 aaPredicted RBP17.85■□□□□ 0.45
PRDM1-203ENST00000369096 PPP1R9BQ96SB3 815 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
PRDM1-203ENST00000369096 MARCKSP29966 332 aaPredicted RBP17.85■□□□□ 0.45
PRDM1-203ENST00000369096 VPS18Q9P253 973 aa17.85■□□□□ 0.45
PRDM1-203ENST00000369096 NCOA1Q15788 1441 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 BMP2KLQ5H9B9 411 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 TRIM7Q9C029 511 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 DNAJC25Q9H1X3 360 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 DACT1Q9NYF0 836 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 SAMD15Q9P1V8 674 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 GUCA1BQ9UMX6 200 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 TSPY3P0CV98 308 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 TSPY8P0CW00 308 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 VAV2P52735 878 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 VTI1AQ96AJ9 217 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 TMX3Q96JJ7 454 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
PRDM1-203ENST00000369096 GMNNO75496 209 aa17.83■□□□□ 0.45
PRDM1-203ENST00000369096 GPATCH8Q9UKJ3 1502 aaKnown RBP17.83■□□□□ 0.45
PRDM1-203ENST00000369096 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.44
PRDM1-203ENST00000369096 MTRF1LQ9UGC7 380 aaKnown RBP17.83■□□□□ 0.44
PRDM1-203ENST00000369096 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.44
PRDM1-203ENST00000369096 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.44
PRDM1-203ENST00000369096 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
PRDM1-203ENST00000369096 TRIM27P14373 513 aa17.83■□□□□ 0.44
PRDM1-203ENST00000369096 ATP2A2P16615 1042 aaKnown RBP17.83■□□□□ 0.44
PRDM1-203ENST00000369096 ALDH3A1P30838 453 aa17.83■□□□□ 0.44
PRDM1-203ENST00000369096 FAM212AQ96EL1 285 aa17.83■□□□□ 0.44
PRDM1-203ENST00000369096 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 TRAF1Q13077 416 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 RTN1Q16799 776 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 DHX58Q96C10 678 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 IFIT1BQ5T764 474 aaKnown RBP17.82■□□□□ 0.44
PRDM1-203ENST00000369096 SEC62Q99442 399 aaKnown RBP17.82■□□□□ 0.44
PRDM1-203ENST00000369096 ABCC11Q96J66 1382 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 KIF14Q15058 1648 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 RHOXF2BP0C7M4 288 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 CALCOCO2Q13137 446 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 KARSQ15046 597 aaKnown RBP17.82■□□□□ 0.44
PRDM1-203ENST00000369096 RHOXF2Q9BQY4 288 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 LZTFL1Q9NQ48 299 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 INF2Q27J81 1249 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.82■□□□□ 0.44
PRDM1-203ENST00000369096 ESR2Q92731 530 aa17.82■□□□□ 0.44
PRDM1-203ENST00000369096 ADAMTS2O95450 1211 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 PFDN4Q9NQP4 134 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 ZFYP08048 801 aaPredicted RBP17.81■□□□□ 0.44
PRDM1-203ENST00000369096 RFC1P35251 1148 aaPredicted RBP17.81■□□□□ 0.44
PRDM1-203ENST00000369096 PPP1R7Q15435 360 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 C6orf50Q9HD87 102 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRDM1-203ENST00000369096 FAM13AO94988 1023 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 TTC31Q49AM3 519 aaPredicted RBP17.81■□□□□ 0.44
PRDM1-203ENST00000369096 HS2ST1Q7LGA3 356 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 MIPOL1Q8TD10 442 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 KRT23Q9C075 422 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 LACTBP83111 547 aaPredicted RBP17.81■□□□□ 0.44
PRDM1-203ENST00000369096 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
PRDM1-203ENST00000369096 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 STMN2Q93045 179 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 UQCRFS1P1P0C7P4 283 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 NAPAP54920 295 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 NAA25Q14CX7 972 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 JARID2Q92833 1246 aaPredicted RBP17.8■□□□□ 0.44
PRDM1-203ENST00000369096 KIF3CO14782 793 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 CCDC14Q49A88 953 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 NEK11Q8NG66 645 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 SMARCC2Q8TAQ2 1214 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 ZNF622Q969S3 477 aaKnown RBP eCLIP17.8■□□□□ 0.44
PRDM1-203ENST00000369096 PTPRCP08575 1304 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 GNAQP50148 359 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 STX17P56962 302 aa17.8■□□□□ 0.44
PRDM1-203ENST00000369096 RSRC1Q96IZ7 334 aaKnown RBP17.8■□□□□ 0.44
PRDM1-203ENST00000369096 FEZ2Q9UHY8 353 aaPredicted RBP17.8■□□□□ 0.44
PRDM1-203ENST00000369096 PI4KAP2A4QPH2 592 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 PI4KAP1Q8N8J0 262 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 WDR66Q8TBY9 1149 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 TUBB4AP04350 444 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
PRDM1-203ENST00000369096 GEN1Q17RS7 908 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 ZNF569Q5MCW4 686 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 INTS8Q75QN2 995 aaKnown RBP17.79■□□□□ 0.44
PRDM1-203ENST00000369096 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
PRDM1-203ENST00000369096 CALM1P0DP23 149 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms