RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CCDC175P0C221 793 aa20.41■□□□□ 0.86
SNX27-203ENST00000368843 UBE2HP62256 183 aa20.41■□□□□ 0.86
SNX27-203ENST00000368843 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.86
SNX27-203ENST00000368843 AKR1B10O60218 316 aa20.41■□□□□ 0.86
SNX27-203ENST00000368843 LDHBP07195 334 aaKnown RBP20.41■□□□□ 0.86
SNX27-203ENST00000368843 BMP2KLQ5H9B9 411 aa20.41■□□□□ 0.86
SNX27-203ENST00000368843 CHST3Q7LGC8 479 aa20.41■□□□□ 0.86
SNX27-203ENST00000368843 PODXL2Q9NZ53 605 aa20.41■□□□□ 0.86
SNX27-203ENST00000368843 SAP30BPQ9UHR5 308 aaKnown RBP20.41■□□□□ 0.86
SNX27-203ENST00000368843 TAF12Q16514 161 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 PPM1EQ8WY54 764 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 PAIP2Q9BPZ3 127 aaKnown RBP20.4■□□□□ 0.86
SNX27-203ENST00000368843 A0A1W2PRG0 241 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 ZNF165P49910 485 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 RTL9Q8NET4 1388 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 SDSP20132 328 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 TNNI2P48788 182 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 UBASH3AP57075 661 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 GNPATO15228 680 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 ARID5AQ03989 594 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 NEMFO60524 1076 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 EYA3Q99504 573 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 RIMS2Q9UQ26 1411 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 UHRF1BP1LA0JNW5 1464 aa20.4■□□□□ 0.86
SNX27-203ENST00000368843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.39■□□□□ 0.86
SNX27-203ENST00000368843 IL16Q14005 1332 aa20.39■□□□□ 0.86
SNX27-203ENST00000368843 EEF2P13639 858 aaKnown RBP20.39■□□□□ 0.86
SNX27-203ENST00000368843 KRT2P35908 639 aa20.39■□□□□ 0.86
SNX27-203ENST00000368843 LMTK3Q96Q04 1460 aa20.39■□□□□ 0.85
SNX27-203ENST00000368843 BMP15O95972 392 aa20.39■□□□□ 0.85
SNX27-203ENST00000368843 IPO4Q8TEX9 1081 aaKnown RBP20.39■□□□□ 0.85
SNX27-203ENST00000368843 PLCG2P16885 1265 aa20.39■□□□□ 0.85
SNX27-203ENST00000368843 NMIQ13287 307 aaPredicted RBP20.39■□□□□ 0.85
SNX27-203ENST00000368843 GIMAP6Q6P9H5 292 aa20.39■□□□□ 0.85
SNX27-203ENST00000368843 ZNF408Q9H9D4 720 aa20.39■□□□□ 0.85
SNX27-203ENST00000368843 DHX58Q96C10 678 aa20.39■□□□□ 0.85
SNX27-203ENST00000368843 ZSCAN22P10073 491 aaPredicted RBP20.38■□□□□ 0.85
SNX27-203ENST00000368843 TRAPPC3LQ5T215 181 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 POTEB2H3BUK9 544 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 IGHDP01880 384 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 MCM7P33993 719 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 NUCB1Q02818 461 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 RAB3GAP1Q15042 981 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 GSTA5Q7RTV2 222 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 TEX14Q8IWB6 1497 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 GNAT2P19087 354 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 PLVAPQ9BX97 442 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 ZRANB1Q9UGI0 708 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 PKD2L1Q9P0L9 805 aa20.38■□□□□ 0.85
SNX27-203ENST00000368843 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
SNX27-203ENST00000368843 CNPY2Q9Y2B0 182 aa20.37■□□□□ 0.85
SNX27-203ENST00000368843 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
SNX27-203ENST00000368843 CGNQ9P2M7 1197 aaKnown RBP20.37■□□□□ 0.85
SNX27-203ENST00000368843 PTGS1P23219 599 aa20.37■□□□□ 0.85
SNX27-203ENST00000368843 KCNG4Q8TDN1 519 aa20.37■□□□□ 0.85
SNX27-203ENST00000368843 APBB1IPQ7Z5R6 666 aaPredicted RBP20.37■□□□□ 0.85
SNX27-203ENST00000368843 SREK1Q8WXA9 508 aaKnown RBP20.37■□□□□ 0.85
SNX27-203ENST00000368843 CTAGE1Q96RT6 745 aa20.37■□□□□ 0.85
SNX27-203ENST00000368843 TMX3Q96JJ7 454 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 GOLGA6L9A6NEM1 432 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 BACH1O14867 736 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 MICALCLQ6ZW33 695 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 CCDC50Q8IVM0 306 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 BBXQ8WY36 941 aaPredicted RBP20.36■□□□□ 0.85
SNX27-203ENST00000368843 ALDH1L1O75891 902 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 GNG11P61952 73 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 TFCP2Q12800 502 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 EHBP1Q8NDI1 1231 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 RALGAPBQ86X10 1494 aa20.36■□□□□ 0.85
SNX27-203ENST00000368843 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
SNX27-203ENST00000368843 HSF2BPO75031 334 aa20.35■□□□□ 0.85
SNX27-203ENST00000368843 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
SNX27-203ENST00000368843 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
SNX27-203ENST00000368843 HSPA2P54652 639 aa20.35■□□□□ 0.85
SNX27-203ENST00000368843 BTG4Q9NY30 223 aa20.35■□□□□ 0.85
SNX27-203ENST00000368843 ZHX1Q9UKY1 873 aaPredicted RBP20.35■□□□□ 0.85
SNX27-203ENST00000368843 ITSN2Q9NZM3 1697 aa20.35■□□□□ 0.85
SNX27-203ENST00000368843 CWF19L2Q2TBE0 894 aaKnown RBP20.35■□□□□ 0.85
SNX27-203ENST00000368843 SELENOOQ9BVL4 669 aa20.35■□□□□ 0.85
SNX27-203ENST00000368843 CYLC1P35663 651 aaPredicted RBP20.34■□□□□ 0.85
SNX27-203ENST00000368843 CEP112Q8N8E3 955 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 ASXL1Q8IXJ9 1541 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 PSMA7O14818 248 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 PLIN2Q99541 437 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 RNF113AO15541 343 aaKnown RBP20.34■□□□□ 0.85
SNX27-203ENST00000368843 ANO6Q4KMQ2 910 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 KRT79Q5XKE5 535 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 CCDC155Q8N6L0 562 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 PICK1Q9NRD5 415 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 CEP135Q66GS9 1140 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 PCDH11XQ9BZA7 1347 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 PCDH11YQ9BZA8 1340 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 ESYT1Q9BSJ8 1104 aa20.34■□□□□ 0.85
SNX27-203ENST00000368843 RXRAP19793 462 aa20.33■□□□□ 0.85
SNX27-203ENST00000368843 PDE1AP54750 535 aa20.33■□□□□ 0.85
SNX27-203ENST00000368843 ABCC1P33527 1531 aa20.33■□□□□ 0.85
SNX27-203ENST00000368843 ATP8B2P98198 1209 aa20.33■□□□□ 0.85
SNX27-203ENST00000368843 CKAP4Q07065 602 aaKnown RBP20.33■□□□□ 0.85
SNX27-203ENST00000368843 ZKSCAN3Q9BRR0 538 aa20.33■□□□□ 0.85
SNX27-203ENST00000368843 PLCH2O75038 1416 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms