RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 ZNF512BQ96KM6 892 aaPredicted RBP29.66■■■□□ 2.34
CLK2-203ENST00000368361 LAMB2P55268 1798 aa29.66■■■□□ 2.34
CLK2-203ENST00000368361 STX6O43752 255 aa29.66■■■□□ 2.34
CLK2-203ENST00000368361 PUM3Q15397 648 aaKnown RBP29.66■■■□□ 2.34
CLK2-203ENST00000368361 WASHC4Q2M389 1173 aa29.65■■■□□ 2.34
CLK2-203ENST00000368361 FOXD4L6Q3SYB3 417 aaPredicted RBP29.65■■■□□ 2.34
CLK2-203ENST00000368361 CCDC152Q4G0S7 254 aa29.65■■■□□ 2.34
CLK2-203ENST00000368361 FOXD4L3Q6VB84 417 aaPredicted RBP29.65■■■□□ 2.34
CLK2-203ENST00000368361 MPHOSPH8Q99549 860 aa29.65■■■□□ 2.34
CLK2-203ENST00000368361 BRPF3Q9ULD4 1205 aa29.65■■■□□ 2.34
CLK2-203ENST00000368361 THSD7AQ9UPZ6 1657 aa29.65■■■□□ 2.34
CLK2-203ENST00000368361 FGFR2P21802 821 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 CCDC102BQ68D86 513 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 CLEC4GQ6UXB4 293 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 MYH7P12883 1935 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 A0A0G2JLW4 131 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 PHKA1P46020 1223 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 FAM182BQ5T319 152 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 LPIN2Q92539 896 aa29.64■■■□□ 2.34
CLK2-203ENST00000368361 LAMA4Q16363 1823 aa29.63■■■□□ 2.33
CLK2-203ENST00000368361 ZSCAN22P10073 491 aaPredicted RBP29.63■■■□□ 2.33
CLK2-203ENST00000368361 NCLP19338 710 aaKnown RBP29.63■■■□□ 2.33
CLK2-203ENST00000368361 CNTNAP4Q9C0A0 1308 aa29.63■■■□□ 2.33
CLK2-203ENST00000368361 BTAF1O14981 1849 aa29.63■■■□□ 2.33
CLK2-203ENST00000368361 GPT2Q8TD30 523 aa29.63■■■□□ 2.33
CLK2-203ENST00000368361 SMIM5Q71RC9 77 aa29.62■■■□□ 2.33
CLK2-203ENST00000368361 ARAP2Q8WZ64 1704 aa29.62■■■□□ 2.33
CLK2-203ENST00000368361 HSP90B1P14625 803 aaKnown RBP29.62■■■□□ 2.33
CLK2-203ENST00000368361 APPBP2Q92624 585 aa29.62■■■□□ 2.33
CLK2-203ENST00000368361 PUS7LQ9H0K6 701 aaKnown RBP29.62■■■□□ 2.33
CLK2-203ENST00000368361 SNAP23O00161 211 aa29.61■■■□□ 2.33
CLK2-203ENST00000368361 ARID4AP29374 1257 aaPredicted RBP29.61■■■□□ 2.33
CLK2-203ENST00000368361 Q6ZUG5 572 aa29.61■■■□□ 2.33
CLK2-203ENST00000368361 XRCC6P12956 609 aaKnown RBP eCLIP29.6■■■□□ 2.331e-7■■■■■ 61.2
CLK2-203ENST00000368361 CAVIN1Q6NZI2 390 aaKnown RBP29.6■■■□□ 2.33
CLK2-203ENST00000368361 GAS2L3Q86XJ1 694 aa29.6■■■□□ 2.33
CLK2-203ENST00000368361 RTL9Q8NET4 1388 aa29.6■■■□□ 2.33
CLK2-203ENST00000368361 FOXP2O15409 715 aa29.6■■■□□ 2.33
CLK2-203ENST00000368361 STK3Q13188 491 aa29.59■■■□□ 2.33
CLK2-203ENST00000368361 TTLL5Q6EMB2 1281 aa29.59■■■□□ 2.33
CLK2-203ENST00000368361 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.59■■■□□ 2.339e-7■■■□□ 18.7
CLK2-203ENST00000368361 MYO5AQ9Y4I1 1855 aaKnown RBP29.59■■■□□ 2.33
CLK2-203ENST00000368361 NHSQ6T4R5 1651 aa29.59■■■□□ 2.33
CLK2-203ENST00000368361 IGHMBP2P38935 993 aaKnown RBP29.59■■■□□ 2.33
CLK2-203ENST00000368361 LRRC2Q9BYS8 371 aa29.59■■■□□ 2.33
CLK2-203ENST00000368361 TCHHQ07283 1943 aa29.58■■■□□ 2.33
CLK2-203ENST00000368361 HMGB1P09429 215 aaKnown RBP29.58■■■□□ 2.33
CLK2-203ENST00000368361 SLC5A1P13866 664 aa29.58■■■□□ 2.33
CLK2-203ENST00000368361 TTF1Q15361 905 aaPredicted RBP29.58■■■□□ 2.33
CLK2-203ENST00000368361 PIH1D3Q9NQM4 214 aaKnown RBP29.58■■■□□ 2.33
CLK2-203ENST00000368361 ISY1Q9ULR0 285 aaKnown RBP29.58■■■□□ 2.33
CLK2-203ENST00000368361 E7EWF7 191 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 F13A1P00488 732 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 UQCRFS1P1P0C7P4 283 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 ERFEQ4G0M1 354 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 COL4A1P02462 1669 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 DHX32Q7L7V1 743 aaKnown RBP29.57■■■□□ 2.32
CLK2-203ENST00000368361 GDPD2Q9HCC8 539 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 NSFL1CQ9UNZ2 370 aaKnown RBP29.57■■■□□ 2.32
CLK2-203ENST00000368361 MTMR6Q9Y217 621 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 SCN7AQ01118 1682 aa29.57■■■□□ 2.32
CLK2-203ENST00000368361 ADD2P35612 726 aa29.56■■■□□ 2.32
CLK2-203ENST00000368361 MRE11P49959 708 aa29.56■■■□□ 2.32
CLK2-203ENST00000368361 SLC9C2Q5TAH2 1124 aa29.56■■■□□ 2.32
CLK2-203ENST00000368361 BICDL1Q6ZP65 573 aa29.56■■■□□ 2.32
CLK2-203ENST00000368361 BCL2L12Q9HB09 334 aa29.56■■■□□ 2.32
CLK2-203ENST00000368361 GPAA1O43292 621 aa29.55■■■□□ 2.32
CLK2-203ENST00000368361 MEX3CQ5U5Q3 659 aaKnown RBP29.55■■■□□ 2.32
CLK2-203ENST00000368361 ZSCAN25Q6NSZ9 544 aa29.55■■■□□ 2.32
CLK2-203ENST00000368361 BRF1Q92994 677 aa29.55■■■□□ 2.32
CLK2-203ENST00000368361 GRPEL1Q9HAV7 217 aa29.55■■■□□ 2.32
CLK2-203ENST00000368361 IDH1O75874 414 aaKnown RBP29.54■■■□□ 2.32
CLK2-203ENST00000368361 TBC1D9BQ66K14 1250 aa29.54■■■□□ 2.32
CLK2-203ENST00000368361 GJD4Q96KN9 370 aaPredicted RBP29.54■■■□□ 2.32
CLK2-203ENST00000368361 RC3H1Q5TC82 1133 aaKnown RBP29.54■■■□□ 2.32
CLK2-203ENST00000368361 C3orf67Q6ZVT6 689 aa29.54■■■□□ 2.32
CLK2-203ENST00000368361 FGAP02671 866 aa29.53■■■□□ 2.32
CLK2-203ENST00000368361 GTF3C6Q969F1 213 aa29.53■■■□□ 2.32
CLK2-203ENST00000368361 RBM27Q9P2N5 1060 aaKnown RBP29.53■■■□□ 2.32
CLK2-203ENST00000368361 CCNL1Q9UK58 526 aaPredicted RBP29.53■■■□□ 2.32
CLK2-203ENST00000368361 RPS6KA4O75676 772 aa29.53■■■□□ 2.32
CLK2-203ENST00000368361 FGD1P98174 961 aa29.53■■■□□ 2.32
CLK2-203ENST00000368361 EXOSC10Q01780 885 aaKnown RBP29.53■■■□□ 2.32
CLK2-203ENST00000368361 ZSCAN23Q3MJ62 389 aa29.53■■■□□ 2.32
CLK2-203ENST00000368361 CTNNA3Q9UI47 895 aa29.53■■■□□ 2.32
CLK2-203ENST00000368361 VPS37CA5D8V6 355 aaPredicted RBP29.52■■■□□ 2.32
CLK2-203ENST00000368361 CHRNDQ07001 517 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 LARP1BQ659C4 914 aaKnown RBP29.52■■■□□ 2.32
CLK2-203ENST00000368361 SPATA5Q8NB90 893 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 PANK2Q9BZ23 570 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 CASZ1Q86V15 1759 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 GNPATO15228 680 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 RASGRF1Q13972 1273 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 USP48Q86UV5 1035 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 CDC5LQ99459 802 aaKnown RBP29.52■■■□□ 2.32
CLK2-203ENST00000368361 SRP68Q9UHB9 627 aaKnown RBP29.52■■■□□ 2.32
CLK2-203ENST00000368361 NARFQ9UHQ1 456 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 CNPY2Q9Y2B0 182 aa29.52■■■□□ 2.32
CLK2-203ENST00000368361 ATRNO75882 1429 aa29.51■■■□□ 2.32
CLK2-203ENST00000368361 HAND2P61296 217 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms