RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 LMBR1LQ6UX01 489 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 USP48Q86UV5 1035 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 PNMA8AQ86V59 439 aaPredicted RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 TRPM4Q8TD43 1214 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 RBM17Q96I25 401 aaKnown RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 PSMD1Q99460 953 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 ADAMTSL1Q8N6G6 1762 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 MYH3P11055 1940 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 RTL9Q8NET4 1388 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 DDX60Q8IY21 1712 aaKnown RBP8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 YDJCA8MPS7 323 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 IFIT5Q13325 482 aaKnown RBP8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 OS9Q13438 667 aaPredicted RBP8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 CIAPIN1Q6FI81 312 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 SAMD7Q7Z3H4 446 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 SMC5Q8IY18 1101 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 NIM1KQ8IY84 436 aa8.38□□□□□ -1.07
RNU1-55P-201ENST00000365510 ASTN2O75129 1339 aaPredicted RBP8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 ANKRD18BA2A2Z9 1011 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 WTIPA6NIX2 430 aaPredicted RBP8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 SURF6O75683 361 aaKnown RBP8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 CSF1RP07333 972 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 ITGA6P23229 1130 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 DOK7Q18PE1 504 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 SLC10A5Q5PT55 438 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 ERC1Q8IUD2 1116 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 TTLL11Q8NHH1 800 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 NLRP3Q96P20 1036 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 CRAMP1Q96RY5 1269 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 CDC5LQ99459 802 aaKnown RBP8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 MCOLN1Q9GZU1 580 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 GREM2Q9H772 168 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 DCTPP1Q9H773 170 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 GPRC5DQ9NZD1 345 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
RNU1-55P-201ENST00000365510 RAB11FIP3O75154 756 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 MAP2K1Q02750 393 aaPredicted RBP8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 TBC1D10BQ4KMP7 808 aaPredicted RBP8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 SAPCD2Q86UD0 394 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 MPNDQ8N594 471 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 COPRSQ9NQ92 184 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 CNOT7Q9UIV1 285 aaKnown RBP8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 ZNRF3Q9ULT6 936 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 NOP58Q9Y2X3 529 aaKnown RBP8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 ATP6V0A2Q9Y487 856 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 COL4A1P02462 1669 aa8.36□□□□□ -1.07
RNU1-55P-201ENST00000365510 ADM5C9JUS6 153 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 CIAO1O76071 339 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 NUCB1Q02818 461 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 PTPN12Q05209 780 aaKnown RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 G3BP1Q13283 466 aaKnown RBP eCLIP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 DGKZQ13574 1117 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 USP50Q70EL3 339 aaPredicted RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 CHD1LQ86WJ1 897 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 CELF1Q92879 486 aaKnown RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 KIF1BPQ96EK5 621 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 LRRCC1Q9C099 1032 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 SIL1Q9H173 461 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 DBNDD1Q9H9R9 158 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 ADARB2Q9NS39 739 aaKnown RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 FBXO3Q9UK99 471 aa8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 PA2G4Q9UQ80 394 aaKnown RBP8.35□□□□□ -1.07
RNU1-55P-201ENST00000365510 APBB1O00213 710 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 PSMD14O00487 310 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 IL15P40933 162 aaPredicted RBP8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 GPSM2P81274 684 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 MLLT1Q03111 559 aaPredicted RBP8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 ANKRD45Q5TZF3 282 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 PRAMEF18Q5VWM3 479 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 MOB2Q70IA6 237 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 MICALL2Q8IY33 904 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 KLHDC4Q8TBB5 520 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 MPHOSPH8Q99549 860 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 CNNM1Q9NRU3 951 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 TRPM7Q96QT4 1865 aa8.34□□□□□ -1.07
RNU1-55P-201ENST00000365510 EYA2O00167 538 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 SLC34A2O95436 690 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 ECE1P42892 770 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 SOX10P56693 466 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 KIF23Q02241 960 aaPredicted RBP8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 LDHAL6AQ6ZMR3 332 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 CLASRPQ8N2M8 674 aaKnown RBP8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 ZNF594Q96JF6 807 aaPredicted RBP8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 BEGAINQ9BUH8 593 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms