RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 EHMT1Q9H9B1 1298 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 E9PCH4 1651 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 ZNHIT6Q9NWK9 470 aaKnown RBP16.06■□□□□ 0.16
CTR9-201ENST00000361367 AOX1Q06278 1338 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 PPFIBP1Q86W92 1011 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
CTR9-201ENST00000361367 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
CTR9-201ENST00000361367 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
CTR9-201ENST00000361367 DHX32Q7L7V1 743 aaKnown RBP16.05■□□□□ 0.16
CTR9-201ENST00000361367 RBM25P49756 843 aaKnown RBP16.05■□□□□ 0.16
CTR9-201ENST00000361367 ODF2Q5BJF6 829 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 FSIP1Q8NA03 581 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 APPBP2Q92624 585 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 GRPEL1Q9HAV7 217 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 AXIN2Q9Y2T1 843 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 TRIM37O94972 964 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
CTR9-201ENST00000361367 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
CTR9-201ENST00000361367 TEX11Q8IYF3 940 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 WDR66Q8TBY9 1149 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 TTC6Q86TZ1 520 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 RXRBP28702 533 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 CCDC173Q0VFZ6 552 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
CTR9-201ENST00000361367 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
CTR9-201ENST00000361367 ZNF521Q96K83 1311 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 SYCP1Q15431 976 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 ZFYVE27Q5T4F4 411 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 CCDC183Q5T5S1 534 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 NDUFB9Q9Y6M9 179 aa16.04■□□□□ 0.16
CTR9-201ENST00000361367 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 TCP11L1Q9NUJ3 509 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 AGLP35573 1532 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 CBFA2T2O43439 604 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
CTR9-201ENST00000361367 AK2P54819 239 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 MPNDQ8N594 471 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 CDC42BPGQ6DT37 1551 aa16.03■□□□□ 0.16
CTR9-201ENST00000361367 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
CTR9-201ENST00000361367 PIGBQ92521 554 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 SNX21Q969T3 373 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 THRAP3Q9Y2W1 955 aaKnown RBP16.02■□□□□ 0.16
CTR9-201ENST00000361367 KDM2BQ8NHM5 1336 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
CTR9-201ENST00000361367 CYP27B1O15528 508 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 SEC24BO95487 1268 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 ALDH1B1P30837 517 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 TRAF1Q13077 416 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 LARGE2Q8N3Y3 721 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 MNS1Q8NEH6 495 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
CTR9-201ENST00000361367 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.16
CTR9-201ENST00000361367 UBA7P41226 1012 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 KLHL10Q6JEL2 608 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 ARMT1Q9H993 441 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 ANO10Q9NW15 660 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 GPAA1O43292 621 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 CALM1P0DP23 149 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 CALM2P0DP24 149 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 CALM3P0DP25 149 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 ZAP70P43403 619 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 APOBRQ0VD83 1088 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.15
CTR9-201ENST00000361367 SPATA5Q8NB90 893 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 TULP4Q9NRJ4 1543 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 KCNQ4P56696 695 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 HEATR3Q7Z4Q2 680 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
CTR9-201ENST00000361367 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 SGSM2O43147 1006 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
CTR9-201ENST00000361367 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 CKAP2LQ8IYA6 745 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 NLGN1Q8N2Q7 840 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
CTR9-201ENST00000361367 CTAGE5O15320 804 aa16■□□□□ 0.15
CTR9-201ENST00000361367 ABCA6Q8N139 1617 aa16■□□□□ 0.15
CTR9-201ENST00000361367 TNS3Q68CZ2 1445 aa16■□□□□ 0.15
CTR9-201ENST00000361367 ATP5JP18859 108 aa16■□□□□ 0.15
CTR9-201ENST00000361367 PDE6BP35913 854 aa16■□□□□ 0.15
CTR9-201ENST00000361367 CHMP4BP1P59074 171 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms