RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 OSBP2Q969R2 916 aa26.84■■□□□ 1.89
LDB1-201ENST00000361198 MSNP26038 577 aaKnown RBP26.83■■□□□ 1.89
LDB1-201ENST00000361198 ZAP70P43403 619 aa26.83■■□□□ 1.89
LDB1-201ENST00000361198 PI16Q6UXB8 463 aa26.83■■□□□ 1.89
LDB1-201ENST00000361198 BARGINQ6ZT62 677 aa26.83■■□□□ 1.89
LDB1-201ENST00000361198 VGLL2Q8N8G2 317 aa26.83■■□□□ 1.89
LDB1-201ENST00000361198 CNPY2Q9Y2B0 182 aa26.83■■□□□ 1.89
LDB1-201ENST00000361198 STK3Q13188 491 aa26.83■■□□□ 1.89
LDB1-201ENST00000361198 MYH14Q7Z406 1995 aaKnown RBP26.82■■□□□ 1.88
LDB1-201ENST00000361198 Q6ZUG5 572 aa26.82■■□□□ 1.88
LDB1-201ENST00000361198 A0A0G2JLW4 131 aa26.82■■□□□ 1.88
LDB1-201ENST00000361198 SUSD4Q5VX71 490 aa26.82■■□□□ 1.88
LDB1-201ENST00000361198 NWD2Q9ULI1 1742 aa26.81■■□□□ 1.88
LDB1-201ENST00000361198 ATP6V1DQ9Y5K8 247 aa26.81■■□□□ 1.88
LDB1-201ENST00000361198 LAMA4Q16363 1823 aa26.8■■□□□ 1.88
LDB1-201ENST00000361198 VPS37CA5D8V6 355 aaPredicted RBP26.8■■□□□ 1.88
LDB1-201ENST00000361198 LARP1BQ659C4 914 aaKnown RBP26.8■■□□□ 1.88
LDB1-201ENST00000361198 LRRC2Q9BYS8 371 aa26.8■■□□□ 1.88
LDB1-201ENST00000361198 FAM177BA6PVY3 158 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 KCNQ2O43526 872 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 PHF14O94880 888 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 PDE8BO95263 885 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 HCLS1P14317 486 aaPredicted RBP26.79■■□□□ 1.88
LDB1-201ENST00000361198 MCAMP43121 646 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 LRRFIP1Q32MZ4 808 aaKnown RBP26.79■■□□□ 1.88
LDB1-201ENST00000361198 TSPY26PQ9H489 355 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 AKAP11Q9UKA4 1901 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 OFD1O75665 1012 aa26.79■■□□□ 1.88
LDB1-201ENST00000361198 ABCC12Q96J65 1359 aa26.78■■□□□ 1.88
LDB1-201ENST00000361198 TOM1O60784 492 aa26.78■■□□□ 1.88
LDB1-201ENST00000361198 CAMTA2O94983 1202 aa26.78■■□□□ 1.88
LDB1-201ENST00000361198 ZFYP08048 801 aaPredicted RBP26.78■■□□□ 1.88
LDB1-201ENST00000361198 WASHC4Q2M389 1173 aa26.78■■□□□ 1.88
LDB1-201ENST00000361198 ZNF500O60304 480 aaPredicted RBP26.78■■□□□ 1.88
LDB1-201ENST00000361198 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.78■■□□□ 1.88
LDB1-201ENST00000361198 HMGB1P09429 215 aaKnown RBP26.77■■□□□ 1.88
LDB1-201ENST00000361198 DHX32Q7L7V1 743 aaKnown RBP26.77■■□□□ 1.88
LDB1-201ENST00000361198 BRF1Q92994 677 aa26.77■■□□□ 1.88
LDB1-201ENST00000361198 GTF3C6Q969F1 213 aa26.77■■□□□ 1.88
LDB1-201ENST00000361198 TTLL5Q6EMB2 1281 aa26.77■■□□□ 1.88
LDB1-201ENST00000361198 AK7Q96M32 723 aa26.77■■□□□ 1.88
LDB1-201ENST00000361198 E7EWF7 191 aa26.76■■□□□ 1.87
LDB1-201ENST00000361198 FOXP2O15409 715 aa26.76■■□□□ 1.87
LDB1-201ENST00000361198 DNM1Q05193 864 aaKnown RBP26.76■■□□□ 1.87
LDB1-201ENST00000361198 UTP14AQ9BVJ6 771 aaKnown RBP26.76■■□□□ 1.87
LDB1-201ENST00000361198 RREB1Q92766 1687 aa26.76■■□□□ 1.87
LDB1-201ENST00000361198 MCM5P33992 734 aa26.76■■□□□ 1.87
LDB1-201ENST00000361198 PUS7LQ9H0K6 701 aaKnown RBP26.76■■□□□ 1.87
LDB1-201ENST00000361198 FIBPO43427 364 aa26.75■■□□□ 1.87
LDB1-201ENST00000361198 HSP90B1P14625 803 aaKnown RBP26.75■■□□□ 1.87
LDB1-201ENST00000361198 PDCP20941 246 aa26.75■■□□□ 1.87
LDB1-201ENST00000361198 CDC37L1Q7L3B6 337 aa26.75■■□□□ 1.87
LDB1-201ENST00000361198 APPBP2Q92624 585 aa26.75■■□□□ 1.87
LDB1-201ENST00000361198 ZNF512BQ96KM6 892 aaPredicted RBP26.75■■□□□ 1.87
LDB1-201ENST00000361198 MYH7P12883 1935 aa26.75■■□□□ 1.87
LDB1-201ENST00000361198 FAM98CQ17RN3 349 aaKnown RBP26.74■■□□□ 1.87
LDB1-201ENST00000361198 HELBQ8NG08 1087 aaPredicted RBP26.74■■□□□ 1.87
LDB1-201ENST00000361198 PDIA4P13667 645 aaKnown RBP26.74■■□□□ 1.87
LDB1-201ENST00000361198 FGD1P98174 961 aa26.74■■□□□ 1.87
LDB1-201ENST00000361198 EXOSC10Q01780 885 aaKnown RBP26.74■■□□□ 1.87
LDB1-201ENST00000361198 ZKSCAN5Q9Y2L8 839 aa26.74■■□□□ 1.87
LDB1-201ENST00000361198 RNF214Q8ND24 703 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 LRP5O75197 1615 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 JAK2O60674 1132 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 TPM2P07951 284 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 PHKA1P46020 1223 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 PARP10Q53GL7 1025 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 CCDC102BQ68D86 513 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 SMARCC1Q92922 1105 aaPredicted RBP26.73■■□□□ 1.87
LDB1-201ENST00000361198 SEC31BQ9NQW1 1179 aa26.73■■□□□ 1.87
LDB1-201ENST00000361198 NIP7Q9Y221 180 aaKnown RBP eCLIP26.73■■□□□ 1.87
LDB1-201ENST00000361198 CICQ96RK0 1608 aaPredicted RBP26.73■■□□□ 1.87
LDB1-201ENST00000361198 MROH5Q6ZUA9 1318 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 KLHL34Q8N239 644 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 FGFR2P21802 821 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 UBE2HP62256 183 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 PUM3Q15397 648 aaKnown RBP26.72■■□□□ 1.87
LDB1-201ENST00000361198 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.72■■□□□ 1.87
LDB1-201ENST00000361198 FERMT3Q86UX7 667 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 FAM184AQ8NB25 1140 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 CCDC39Q9UFE4 941 aa26.72■■□□□ 1.87
LDB1-201ENST00000361198 SCRN1Q12765 414 aa26.71■■□□□ 1.87
LDB1-201ENST00000361198 AGXT2Q9BYV1 514 aa26.71■■□□□ 1.87
LDB1-201ENST00000361198 TERF1P54274 439 aa26.7■■□□□ 1.87
LDB1-201ENST00000361198 CCDC183Q5T5S1 534 aa26.7■■□□□ 1.87
LDB1-201ENST00000361198 LPIN2Q92539 896 aa26.7■■□□□ 1.87
LDB1-201ENST00000361198 MYO5AQ9Y4I1 1855 aaKnown RBP26.7■■□□□ 1.87
LDB1-201ENST00000361198 NTSR2O95665 410 aa26.7■■□□□ 1.86
LDB1-201ENST00000361198 FGAP02671 866 aa26.7■■□□□ 1.86
LDB1-201ENST00000361198 TPRNQ4KMQ1 711 aa26.7■■□□□ 1.86
LDB1-201ENST00000361198 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.7■■□□□ 1.861e-12■■■■□ 23.4
LDB1-201ENST00000361198 GPAA1O43292 621 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 LETM1O95202 739 aaPredicted RBP26.69■■□□□ 1.86
LDB1-201ENST00000361198 ARID4AP29374 1257 aaPredicted RBP26.69■■□□□ 1.86
LDB1-201ENST00000361198 APOBRQ0VD83 1088 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 UVSSAQ2YD98 709 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 CHST3Q7LGC8 479 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 CTNNA3Q9UI47 895 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 DDX60Q8IY21 1712 aaKnown RBP26.69■■□□□ 1.86
LDB1-201ENST00000361198 SNAP23O00161 211 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms