RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 RXRAP19793 462 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 KCNG4Q8TDN1 519 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 TBCAO75347 108 aaKnown RBP24.11■■□□□ 1.45
SMURF1-201ENST00000361125 HDAC9Q9UKV0 1011 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 DNAI2Q9GZS0 605 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 NSFL1CQ9UNZ2 370 aaKnown RBP24.11■■□□□ 1.45
SMURF1-201ENST00000361125 NPC1L1Q9UHC9 1359 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 CETN1Q12798 172 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 MCM9Q9NXL9 1143 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 TFCP2L1Q9NZI6 479 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 INSRP06213 1382 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 ABCC2Q92887 1545 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 IL13P35225 146 aa24.11■■□□□ 1.45
SMURF1-201ENST00000361125 ZBTB7BO15156 539 aaPredicted RBP24.1■■□□□ 1.45
SMURF1-201ENST00000361125 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
SMURF1-201ENST00000361125 TMCO5BA8MYB1 307 aa24.1■■□□□ 1.45
SMURF1-201ENST00000361125 CEP135Q66GS9 1140 aa24.1■■□□□ 1.45
SMURF1-201ENST00000361125 STXBP4Q6ZWJ1 553 aa24.1■■□□□ 1.45
SMURF1-201ENST00000361125 MRPS27Q92552 414 aaKnown RBP24.1■■□□□ 1.45
SMURF1-201ENST00000361125 N4BP3O15049 544 aa24.1■■□□□ 1.45
SMURF1-201ENST00000361125 CAVIN2O95810 425 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 PAFAH1B1P43034 410 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 BICD1Q96G01 975 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 RMND1Q9NWS8 449 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 GCC2Q8IWJ2 1684 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 CHMLP26374 656 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 SPDYE4A6NLX3 237 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 LRRC27Q9C0I9 530 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 DACT1Q9NYF0 836 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 SNW1Q13573 536 aaKnown RBP24.09■■□□□ 1.45
SMURF1-201ENST00000361125 ALS2CR12Q96Q35 445 aa24.09■■□□□ 1.45
SMURF1-201ENST00000361125 FAM89AQ96GI7 184 aa24.08■■□□□ 1.45
SMURF1-201ENST00000361125 VEZTQ9HBM0 779 aa24.08■■□□□ 1.45
SMURF1-201ENST00000361125 UBASH3AP57075 661 aa24.08■■□□□ 1.45
SMURF1-201ENST00000361125 ORAI2Q96SN7 254 aa24.08■■□□□ 1.45
SMURF1-201ENST00000361125 PUF60Q9UHX1 559 aaKnown RBP24.08■■□□□ 1.45
SMURF1-201ENST00000361125 GNAT2P19087 354 aa24.08■■□□□ 1.44
SMURF1-201ENST00000361125 NOP2P46087 812 aaKnown RBP24.08■■□□□ 1.44
SMURF1-201ENST00000361125 RUFY3Q7L099 469 aa24.08■■□□□ 1.44
SMURF1-201ENST00000361125 PLCD4Q9BRC7 762 aa24.08■■□□□ 1.44
SMURF1-201ENST00000361125 FAM200AQ8TCP9 573 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 ZKSCAN3Q9BRR0 538 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 PAXBP1Q9Y5B6 917 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 CCDC171Q6TFL3 1326 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 OGFOD1Q8N543 542 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 ERMNQ8TAM6 284 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 DHX58Q96C10 678 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 LGR6Q9HBX8 967 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 PARP3Q9Y6F1 533 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 PRPF4BQ13523 1007 aaKnown RBP24.07■■□□□ 1.44
SMURF1-201ENST00000361125 MAP9Q49MG5 647 aa24.07■■□□□ 1.44
SMURF1-201ENST00000361125 GNPATO15228 680 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 HS1BP3Q53T59 392 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 ZNF790Q6PG37 636 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 GSTTP1A0A1W2PQM5 241 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 CCDC129Q6ZRS4 1044 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 DDX21Q9NR30 783 aaKnown RBP eCLIP24.06■■□□□ 1.44
SMURF1-201ENST00000361125 BCCIPQ9P287 314 aaKnown RBP eCLIP24.06■■□□□ 1.44
SMURF1-201ENST00000361125 DNAJC25Q9H1X3 360 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 RTL9Q8NET4 1388 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 GNAQP50148 359 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 RBM26Q5T8P6 1007 aaKnown RBP24.06■■□□□ 1.44
SMURF1-201ENST00000361125 KLHDC4Q8TBB5 520 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 DYDC1Q8WWB3 177 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 FERMT2Q96AC1 680 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 ATP7AQ04656 1500 aa24.06■■□□□ 1.44
SMURF1-201ENST00000361125 CALM1P0DP23 149 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 CALM2P0DP24 149 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 CALM3P0DP25 149 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 CPA1P15085 419 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 IFFO1Q0D2I5 559 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 AOPEPQ8N6M6 819 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 UBE2Q2Q8WVN8 375 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 ZC3H12CQ9C0D7 883 aaKnown RBP24.05■■□□□ 1.44
SMURF1-201ENST00000361125 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 SMARCC2Q8TAQ2 1214 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 SPATA31E1Q6ZUB1 1445 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 SBNO1A3KN83 1393 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 GOLGA6L7A0A1B0GV03 622 aa24.05■■□□□ 1.44
SMURF1-201ENST00000361125 TTC12Q9H892 705 aaPredicted RBP24.05■■□□□ 1.44
SMURF1-201ENST00000361125 EDC4Q6P2E9 1401 aaKnown RBP24.05■■□□□ 1.44
SMURF1-201ENST00000361125 OTUD7AQ8TE49 926 aaPredicted RBP24.05■■□□□ 1.44
SMURF1-201ENST00000361125 DDX17Q92841 729 aaKnown RBP24.05■■□□□ 1.44
SMURF1-201ENST00000361125 PTPDC1A2A3K4 754 aa24.04■■□□□ 1.44
SMURF1-201ENST00000361125 BMP15O95972 392 aa24.04■■□□□ 1.44
SMURF1-201ENST00000361125 RRAGDQ9NQL2 400 aaPredicted RBP24.04■■□□□ 1.44
SMURF1-201ENST00000361125 CCDC186Q7Z3E2 898 aa24.04■■□□□ 1.44
SMURF1-201ENST00000361125 RTL1A6NKG5 1358 aa24.04■■□□□ 1.44
SMURF1-201ENST00000361125 LDHBP07195 334 aaKnown RBP24.04■■□□□ 1.44
SMURF1-201ENST00000361125 KRT2P35908 639 aa24.04■■□□□ 1.44
SMURF1-201ENST00000361125 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
SMURF1-201ENST00000361125 LMTK3Q96Q04 1460 aa24.03■■□□□ 1.44
SMURF1-201ENST00000361125 TIMM10P62072 90 aa24.03■■□□□ 1.44
SMURF1-201ENST00000361125 RRP36Q96EU6 259 aaKnown RBP24.03■■□□□ 1.44
SMURF1-201ENST00000361125 SPTLC2O15270 562 aa24.03■■□□□ 1.44
SMURF1-201ENST00000361125 ITGA6P23229 1130 aa24.03■■□□□ 1.44
SMURF1-201ENST00000361125 ANKRD2Q9GZV1 360 aa24.03■■□□□ 1.44
SMURF1-201ENST00000361125 ZSWIM4Q9H7M6 989 aa24.03■■□□□ 1.44
SMURF1-201ENST00000361125 JADE2Q9NQC1 790 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms