RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PAXBP1Q9Y5B6 917 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 CHD1O14646 1710 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 UNC13BO14795 1591 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 JAK2O60674 1132 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 DZIP3Q86Y13 1208 aaKnown RBP18.81■□□□□ 0.6
SCAF1-201ENST00000360565 ESR2Q92731 530 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 CNNM2Q9H8M5 875 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 STAP2Q9UGK3 403 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 DDX17Q92841 729 aaKnown RBP18.81■□□□□ 0.6
SCAF1-201ENST00000360565 CGNQ9P2M7 1197 aaKnown RBP18.81■□□□□ 0.6
SCAF1-201ENST00000360565 NEURL1BA8MQ27 555 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 CASQ1P31415 396 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 TMTC2Q8N394 836 aa18.81■□□□□ 0.6
SCAF1-201ENST00000360565 AFMP43652 599 aa18.8■□□□□ 0.6
SCAF1-201ENST00000360565 RASEFQ8IZ41 740 aa18.8■□□□□ 0.6
SCAF1-201ENST00000360565 NUP88Q99567 741 aaPredicted RBP18.8■□□□□ 0.6
SCAF1-201ENST00000360565 CWC15Q9P013 229 aaKnown RBP18.8■□□□□ 0.6
SCAF1-201ENST00000360565 A0A0D9SFI3 127 aa18.8■□□□□ 0.6
SCAF1-201ENST00000360565 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
SCAF1-201ENST00000360565 HSPA2P54652 639 aa18.8■□□□□ 0.6
SCAF1-201ENST00000360565 KANK3Q6NY19 840 aa18.8■□□□□ 0.6
SCAF1-201ENST00000360565 LEO1Q8WVC0 666 aaPredicted RBP18.8■□□□□ 0.6
SCAF1-201ENST00000360565 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCAF1-201ENST00000360565 LEKR1Q6ZMV7 388 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 MIGA1Q8NAN2 632 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 CCDC191Q8NCU4 936 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 GPT2Q8TD30 523 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 ERICH4A6NGS2 130 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 UBA7P41226 1012 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 PDE4BQ07343 736 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 OTUD7BQ6GQQ9 843 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 GNG11P61952 73 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 STX8Q9UNK0 236 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 ABCC3O15438 1527 aa18.79■□□□□ 0.6
SCAF1-201ENST00000360565 FSD2A1L4K1 749 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 KIF5BP33176 963 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 PROSER3Q2NL68 480 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 PCDH11XQ9BZA7 1347 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 PCDH11YQ9BZA8 1340 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 ANKRD18AQ8IVF6 992 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 SSH2Q76I76 1423 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 MAGEB6Q8N7X4 407 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 CCDC102AQ96A19 550 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 ATP5JP18859 108 aa18.78■□□□□ 0.6
SCAF1-201ENST00000360565 C17orf53Q8N3J3 647 aaPredicted RBP18.78■□□□□ 0.6
SCAF1-201ENST00000360565 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
SCAF1-201ENST00000360565 FAM160A1Q05DH4 1040 aa18.77■□□□□ 0.6
SCAF1-201ENST00000360565 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
SCAF1-201ENST00000360565 BRAPQ7Z569 592 aa18.77■□□□□ 0.6
SCAF1-201ENST00000360565 VAT1LQ9HCJ6 419 aa18.77■□□□□ 0.6
SCAF1-201ENST00000360565 USP6P35125 1406 aa18.77■□□□□ 0.6
SCAF1-201ENST00000360565 SETQ01105 290 aaPredicted RBP18.77■□□□□ 0.6
SCAF1-201ENST00000360565 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
SCAF1-201ENST00000360565 KAT14Q9H8E8 782 aa18.77■□□□□ 0.6
SCAF1-201ENST00000360565 CDR1P51861 262 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 NGLY1Q96IV0 654 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 IFNKQ9P0W0 207 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 DNAI1Q9UI46 699 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 N4BP3O15049 544 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 V9GYY5 206 aaPredicted RBP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 FAM193AP78312 1265 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 ZNF397Q8NF99 534 aaPredicted RBP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 CRNKL1Q9BZJ0 848 aaKnown RBP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 B4E1Z4 1266 aa18.76■□□□□ 0.59
SCAF1-201ENST00000360565 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 LLPHQ9BRT6 129 aaKnown RBP18.76■□□□□ 0.59
SCAF1-201ENST00000360565 APPBP2Q92624 585 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 MTMR6Q9Y217 621 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 ITGA6P23229 1130 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 ZFYVE27Q5T4F4 411 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 CCDC148Q8NFR7 591 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 UTP14AQ9BVJ6 771 aaKnown RBP18.75■□□□□ 0.59
SCAF1-201ENST00000360565 TCP11L1Q9NUJ3 509 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 TPCN1Q9ULQ1 816 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 CDC42BPBQ9Y5S2 1711 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 TRIM75PA6NK02 468 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 GPAA1O43292 621 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 IDEP14735 1019 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 ADCK5Q3MIX3 580 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 FKBP15Q5T1M5 1219 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 ATL3Q6DD88 541 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
SCAF1-201ENST00000360565 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
SCAF1-201ENST00000360565 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
SCAF1-201ENST00000360565 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 YEATS4O95619 227 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 SPA17Q15506 151 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
SCAF1-201ENST00000360565 CBX8Q9HC52 389 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 MADDQ8WXG6 1647 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 CFAP74Q9C0B2 1584 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms