RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 UQCRFS1P1P0C7P4 283 aa28.04■■■□□ 2.08
SDF4-202ENST00000360001 PI16Q6UXB8 463 aa28.04■■■□□ 2.08
SDF4-202ENST00000360001 KIF2CQ99661 725 aa28.04■■■□□ 2.08
SDF4-202ENST00000360001 ZAP70P43403 619 aa28.04■■■□□ 2.08
SDF4-202ENST00000360001 TICAM2Q86XR7 235 aa28.04■■■□□ 2.08
SDF4-202ENST00000360001 A0A0D9SFI3 127 aa28.03■■■□□ 2.08
SDF4-202ENST00000360001 PDGFDQ9GZP0 370 aaPredicted RBP28.03■■■□□ 2.08
SDF4-202ENST00000360001 EPB41L2O43491 1005 aaKnown RBP28.02■■■□□ 2.08
SDF4-202ENST00000360001 BCAMP50895 628 aa28.02■■■□□ 2.08
SDF4-202ENST00000360001 CRAMP1Q96RY5 1269 aa28.02■■■□□ 2.08
SDF4-202ENST00000360001 RAD50Q92878 1312 aa28.02■■■□□ 2.08
SDF4-202ENST00000360001 SLC51AQ86UW1 340 aa28.01■■■□□ 2.07
SDF4-202ENST00000360001 LSG1Q9H089 658 aaKnown RBP28.01■■■□□ 2.07
SDF4-202ENST00000360001 CHGBP05060 677 aa28■■■□□ 2.07
SDF4-202ENST00000360001 MED23Q9ULK4 1368 aa28■■■□□ 2.07
SDF4-202ENST00000360001 HMG20BQ9P0W2 317 aa27.99■■■□□ 2.07
SDF4-202ENST00000360001 ZNF804BA4D1E1 1349 aa27.99■■■□□ 2.07
SDF4-202ENST00000360001 BBOX1O75936 387 aa27.99■■■□□ 2.07
SDF4-202ENST00000360001 CYP2E1P05181 493 aaPredicted RBP27.99■■■□□ 2.07
SDF4-202ENST00000360001 SRGNP10124 158 aa27.99■■■□□ 2.07
SDF4-202ENST00000360001 COL11A2P13942 1736 aaPredicted RBP27.99■■■□□ 2.07
SDF4-202ENST00000360001 RASGRF1Q13972 1273 aa27.99■■■□□ 2.07
SDF4-202ENST00000360001 PDE6BP35913 854 aa27.98■■■□□ 2.07
SDF4-202ENST00000360001 KCNJ4P48050 445 aa27.97■■■□□ 2.07
SDF4-202ENST00000360001 KIAA1211Q6ZU35 1233 aa27.97■■■□□ 2.07
SDF4-202ENST00000360001 GYG1P46976 350 aa27.97■■■□□ 2.07
SDF4-202ENST00000360001 SPATA5Q8NB90 893 aa27.97■■■□□ 2.07
SDF4-202ENST00000360001 KLRK1P26718 216 aa27.96■■■□□ 2.07
SDF4-202ENST00000360001 NPR1P16066 1061 aa27.95■■■□□ 2.07
SDF4-202ENST00000360001 ZNF589Q86UQ0 364 aaPredicted RBP27.95■■■□□ 2.07
SDF4-202ENST00000360001 FAM84BQ96KN1 310 aaPredicted RBP27.95■■■□□ 2.07
SDF4-202ENST00000360001 MYH7P12883 1935 aa27.95■■■□□ 2.07
SDF4-202ENST00000360001 XDHP47989 1333 aa27.95■■■□□ 2.06
SDF4-202ENST00000360001 IRS2Q9Y4H2 1338 aa27.95■■■□□ 2.06
SDF4-202ENST00000360001 RNF113AO15541 343 aaKnown RBP27.95■■■□□ 2.06
SDF4-202ENST00000360001 PTH1RQ03431 593 aa27.95■■■□□ 2.06
SDF4-202ENST00000360001 TTF1Q15361 905 aaPredicted RBP27.95■■■□□ 2.06
SDF4-202ENST00000360001 SLFNL1Q499Z3 407 aa27.95■■■□□ 2.06
SDF4-202ENST00000360001 ANKIB1Q9P2G1 1089 aa27.95■■■□□ 2.06
SDF4-202ENST00000360001 CAVIN4Q5BKX8 364 aa27.94■■■□□ 2.06
SDF4-202ENST00000360001 ZMYM1Q5SVZ6 1142 aa27.94■■■□□ 2.06
SDF4-202ENST00000360001 SEC62Q99442 399 aaKnown RBP27.94■■■□□ 2.06
SDF4-202ENST00000360001 PIH1D3Q9NQM4 214 aaKnown RBP27.94■■■□□ 2.06
SDF4-202ENST00000360001 LRRC37AA6NMS7 1700 aa27.94■■■□□ 2.06
SDF4-202ENST00000360001 MYO5AQ9Y4I1 1855 aaKnown RBP27.94■■■□□ 2.06
SDF4-202ENST00000360001 CCDC171Q6TFL3 1326 aa27.94■■■□□ 2.06
SDF4-202ENST00000360001 MCCP23508 829 aa27.93■■■□□ 2.06
SDF4-202ENST00000360001 FBXO33Q7Z6M2 555 aa27.93■■■□□ 2.06
SDF4-202ENST00000360001 LEMD3Q9Y2U8 911 aa27.93■■■□□ 2.06
SDF4-202ENST00000360001 LRRFIP1Q32MZ4 808 aaKnown RBP27.93■■■□□ 2.06
SDF4-202ENST00000360001 MCMDC2Q4G0Z9 681 aa27.93■■■□□ 2.06
SDF4-202ENST00000360001 HSPA4P34932 840 aa27.92■■■□□ 2.06
SDF4-202ENST00000360001 GPSM2P81274 684 aa27.92■■■□□ 2.06
SDF4-202ENST00000360001 TMC4Q7Z404 712 aa27.92■■■□□ 2.06
SDF4-202ENST00000360001 SLC16A10Q8TF71 515 aa27.92■■■□□ 2.06
SDF4-202ENST00000360001 HELLSQ9NRZ9 838 aa27.92■■■□□ 2.06
SDF4-202ENST00000360001 PALD1Q9ULE6 856 aa27.92■■■□□ 2.06
SDF4-202ENST00000360001 ZFYP08048 801 aaPredicted RBP27.91■■■□□ 2.06
SDF4-202ENST00000360001 MASTLQ96GX5 879 aa27.91■■■□□ 2.06
SDF4-202ENST00000360001 GNL3LQ9NVN8 582 aaKnown RBP27.91■■■□□ 2.06
SDF4-202ENST00000360001 DOCK2Q92608 1830 aa27.91■■■□□ 2.06
SDF4-202ENST00000360001 PPEF1O14829 653 aaPredicted RBP27.91■■■□□ 2.06
SDF4-202ENST00000360001 COL1A1P02452 1464 aaPredicted RBP27.9■■■□□ 2.06
SDF4-202ENST00000360001 TXNRD3Q86VQ6 643 aa27.9■■■□□ 2.06
SDF4-202ENST00000360001 VPS37DQ86XT2 251 aa27.9■■■□□ 2.06
SDF4-202ENST00000360001 IQSEC3Q9UPP2 1182 aaPredicted RBP27.9■■■□□ 2.06
SDF4-202ENST00000360001 ANAPC15P60006 121 aa27.9■■■□□ 2.06
SDF4-202ENST00000360001 CCDC129Q6ZRS4 1044 aa27.9■■■□□ 2.06
SDF4-202ENST00000360001 MAP4K1Q92918 833 aa27.9■■■□□ 2.06
SDF4-202ENST00000360001 IL17RAQ96F46 866 aa27.9■■■□□ 2.06
SDF4-202ENST00000360001 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.9■■■□□ 2.066e-7■□□□□ 8.8
SDF4-202ENST00000360001 LTBP1Q14766 1721 aa27.89■■■□□ 2.06
SDF4-202ENST00000360001 ALDH1B1P30837 517 aa27.89■■■□□ 2.06
SDF4-202ENST00000360001 SP8Q8IXZ3 490 aa27.89■■■□□ 2.06
SDF4-202ENST00000360001 PODXL2Q9NZ53 605 aa27.89■■■□□ 2.06
SDF4-202ENST00000360001 HIBADHP31937 336 aaKnown RBP27.88■■■□□ 2.05
SDF4-202ENST00000360001 SLC4A3P48751 1232 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 RABEP1Q15276 862 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 C2CD5Q86YS7 1000 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 TBC1D2Q9BYX2 928 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 NSFL1CQ9UNZ2 370 aaKnown RBP27.88■■■□□ 2.05
SDF4-202ENST00000360001 MAST3O60307 1309 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 BECN1Q14457 450 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 OSBP2Q969R2 916 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 ATP6V0A2Q9Y487 856 aa27.88■■■□□ 2.05
SDF4-202ENST00000360001 IDH1O75874 414 aaKnown RBP27.87■■■□□ 2.05
SDF4-202ENST00000360001 ADD2P35612 726 aa27.87■■■□□ 2.05
SDF4-202ENST00000360001 ZSCAN25Q6NSZ9 544 aa27.87■■■□□ 2.05
SDF4-202ENST00000360001 C15orf52Q6ZUT6 534 aaKnown RBP27.87■■■□□ 2.05
SDF4-202ENST00000360001 UPF1Q92900 1129 aaKnown RBP eCLIP27.87■■■□□ 2.055e-9■■■■■ 30.1
SDF4-202ENST00000360001 SEMA3EO15041 775 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 ATP2B4P23634 1241 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 H0YIN7 160 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 M0R2C6 588 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 SLC9C2Q5TAH2 1124 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 APPBP2Q92624 585 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 GGA1Q9UJY5 639 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 DENND2AQ9ULE3 1009 aa27.86■■■□□ 2.05
SDF4-202ENST00000360001 RBM8AQ9Y5S9 174 aaKnown RBP27.86■■■□□ 2.05
SDF4-202ENST00000360001 MYH13Q9UKX3 1938 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms