RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 SMC3Q9UQE7 1217 aa7.47□□□□□ -1.21
CX3CR1-201ENST00000358309 XRN1Q8IZH2 1706 aaKnown RBP7.46□□□□□ -1.21
CX3CR1-201ENST00000358309 MMP10P09238 476 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 CYP2D6P10635 497 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 GRIK5Q16478 980 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 SPECC1Q5M775 1068 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 PRAMEF18Q5VWM3 479 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 GPIHBP1Q8IV16 184 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 ANKRD18AQ8IVF6 992 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 CNBD1Q8NA66 436 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 SLC44A5Q8NCS7 719 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 SPATA31A5Q5VU36 1347 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 SPATA31A7Q8IWB4 1347 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 TRAK2O60296 914 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 GNL2Q13823 731 aaKnown RBP7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 CREB3L3Q68CJ9 461 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 BLOC1S2Q6QNY1 142 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 Q6ZUG5 572 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 KIAA0825Q8IV33 1275 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 ITSN1Q15811 1721 aa7.46□□□□□ -1.22
CX3CR1-201ENST00000358309 ZNF532Q9HCE3 1301 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 H3BQV1 296 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 GADD45BO75293 160 aaPredicted RBP7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 UFL1O94874 794 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 ZYXQ15942 572 aaKnown RBP7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 TXNRD1Q16881 649 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 HSP90AB4PQ58FF6 505 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 IFFO2Q5TF58 517 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 ZBTB38Q8NAP3 1195 aaPredicted RBP7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 FAM184AQ8NB25 1140 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 CCDC191Q8NCU4 936 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 CNPY2Q9Y2B0 182 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 DLK2Q6UY11 383 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 CCDC84Q86UT8 332 aaPredicted RBP7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 SGSM2O43147 1006 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 MAPKAPK5Q8IW41 473 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 CKAP2LQ8IYA6 745 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 CYP46A1Q9Y6A2 500 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 SLC4A4Q9Y6R1 1079 aa7.45□□□□□ -1.22
CX3CR1-201ENST00000358309 PDE4DIPQ5VU43 2346 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 H7C1W4 665 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 CPLX1O14810 134 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 GPAA1O43292 621 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 CYP2E1P05181 493 aaPredicted RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 CYP21A2P08686 494 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 TAL1P17542 331 aaPredicted RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 GJB2P29033 226 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 GTF2IP78347 998 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 RALYLQ86SE5 291 aaKnown RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 DYNLL2Q96FJ2 89 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 TRPC5Q9UL62 973 aaPredicted RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 TPCN1Q9ULQ1 816 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 RGPD5Q99666 1765 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 MPHOSPH10O00566 681 aaKnown RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 SLC27A2O14975 620 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 GOLGA8HP0CJ92 632 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 RXRBP28702 533 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 SF3B2Q13435 895 aaKnown RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 POLA2Q14181 598 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 R3HDM1Q15032 1099 aaKnown RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 ME3Q16798 604 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 LARP1BQ659C4 914 aaKnown RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 ZNF526Q8TF50 670 aaPredicted RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 USP54Q70EL1 1684 aa7.44□□□□□ -1.22
CX3CR1-201ENST00000358309 SYCE3A1L190 88 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 GOLGA6L4A6NEF3 574 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 C21orf2O43822 256 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 CAMTA2O94983 1202 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 IL15P40933 162 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 RFX5P48382 616 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 GRM1Q13255 1194 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 ZNF827Q17R98 1081 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 CCDC152Q4G0S7 254 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 RUFY3Q7L099 469 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 EVI5LQ96CN4 794 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 CHMP5Q9NZZ3 219 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 STX8Q9UNK0 236 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 PDE8AO60658 829 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 COBLO75128 1261 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 RAD17O75943 681 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 SERPINB2P05120 415 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 ERCC3P19447 782 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 MCM4P33991 863 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 ADD1P35611 737 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 EIF5P55010 431 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 SNAP25P60880 206 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 ERC1Q8IUD2 1116 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 FNBP4Q8N3X1 1017 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 LCORLQ8N3X6 602 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 RUFY2Q8WXA3 655 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 NAPBQ9H115 298 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 HMG20BQ9P0W2 317 aa7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 ZBTB12Q9Y330 459 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-201ENST00000358309 FGAP02671 866 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms