RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 RXRBP28702 533 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 HOXC9P31274 260 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 ACTN2P35609 894 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 LEKR1Q6ZMV7 388 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 ORC3Q9UBD5 711 aaPredicted RBP12.56□□□□□ -0.4
FN1-205ENST00000357867 STAMBPO95630 424 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 KIF5CO60282 957 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 WDR70Q9NW82 654 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 BMS1Q14692 1282 aaKnown RBP12.56□□□□□ -0.4
FN1-205ENST00000357867 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 EFCAB6Q5THR3 1501 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 PUM3Q15397 648 aaKnown RBP12.55□□□□□ -0.4
FN1-205ENST00000357867 RBM28Q9NW13 759 aaKnown RBP12.55□□□□□ -0.4
FN1-205ENST00000357867 CSADQ9Y600 493 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 TNFAIP1Q13829 316 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
FN1-205ENST00000357867 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 TTC16Q8NEE8 873 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 KDM5DQ9BY66 1539 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 TEX11Q8IYF3 940 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
FN1-205ENST00000357867 YEATS4O95619 227 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 MAP9Q49MG5 647 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 MSANTD4Q8NCY6 345 aa12.55□□□□□ -0.4
FN1-205ENST00000357867 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
FN1-205ENST00000357867 PDE8AO60658 829 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
FN1-205ENST00000357867 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 TSNARE1Q96NA8 513 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 BACH1O14867 736 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 RHPN1Q8TCX5 695 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 QTRT2Q9H974 415 aaKnown RBP12.54□□□□□ -0.4
FN1-205ENST00000357867 CAMK4Q16566 473 aa12.54□□□□□ -0.4
FN1-205ENST00000357867 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
FN1-205ENST00000357867 DDX12PQ92771 950 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 ALS2CR12Q96Q35 445 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 LPXNO60711 386 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
FN1-205ENST00000357867 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
FN1-205ENST00000357867 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
FN1-205ENST00000357867 FERMT3Q86UX7 667 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
FN1-205ENST00000357867 BABAM1Q9NWV8 329 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 CEP152O94986 1710 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
FN1-205ENST00000357867 FAM13AO94988 1023 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 MYZAPP0CAP1 466 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 NAP1L4Q99733 375 aaKnown RBP12.53□□□□□ -0.4
FN1-205ENST00000357867 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 PAFAH1B1P43034 410 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 LUZP1Q86V48 1076 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 PLBD2Q8NHP8 589 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 TBC1D22AQ8WUA7 517 aa12.53□□□□□ -0.4
FN1-205ENST00000357867 DKC1O60832 514 aaKnown RBP eCLIP12.53□□□□□ -0.42e-32■□□□□ 9.9
FN1-205ENST00000357867 CASQ1P31415 396 aa12.52□□□□□ -0.4
FN1-205ENST00000357867 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.4
FN1-205ENST00000357867 ALG1Q9BT22 464 aa12.52□□□□□ -0.4
FN1-205ENST00000357867 TCOF1Q13428 1488 aaKnown RBP12.52□□□□□ -0.4
FN1-205ENST00000357867 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.4
FN1-205ENST00000357867 M0QZ92 97 aa12.52□□□□□ -0.4
FN1-205ENST00000357867 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.4
FN1-205ENST00000357867 SREK1Q8WXA9 508 aaKnown RBP12.52□□□□□ -0.4
FN1-205ENST00000357867 KRT2P35908 639 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
FN1-205ENST00000357867 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
FN1-205ENST00000357867 FBLN1P23142 703 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 NOP2P46087 812 aaKnown RBP12.52□□□□□ -0.41
FN1-205ENST00000357867 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 CCDC102BQ68D86 513 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 TTC41PQ6P2S7 1318 aa12.52□□□□□ -0.41
FN1-205ENST00000357867 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
FN1-205ENST00000357867 PABPC4Q13310 644 aaKnown RBP eCLIP12.51□□□□□ -0.41
FN1-205ENST00000357867 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
FN1-205ENST00000357867 OTUD7BQ6GQQ9 843 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 SLC8A3P57103 927 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 STX1AQ16623 288 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 HACE1Q8IYU2 909 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
FN1-205ENST00000357867 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 GJB2P29033 226 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 IRX3P78415 501 aaPredicted RBP12.51□□□□□ -0.41
FN1-205ENST00000357867 FAM196AQ6ZSG2 479 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms