RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CC2D2BQ6DHV5 1058 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 PELP1Q8IZL8 1130 aaKnown RBP31.24■■■□□ 2.59
SSBP3-202ENST00000357475 DBNDD2Q9BQY9 259 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 DBNLQ9UJU6 430 aaKnown RBP31.24■■■□□ 2.59
SSBP3-202ENST00000357475 AKAP2Q9Y2D5 859 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 C6orf229H3BNL8 230 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 LPIN2Q92539 896 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 LEMD3Q9Y2U8 911 aa31.24■■■□□ 2.59
SSBP3-202ENST00000357475 XAGE2Q96GT9 111 aa31.23■■■□□ 2.59
SSBP3-202ENST00000357475 SLC5A1P13866 664 aa31.21■■■□□ 2.59
SSBP3-202ENST00000357475 RTKN2Q8IZC4 609 aa31.21■■■□□ 2.59
SSBP3-202ENST00000357475 RTFDC1Q9BY42 306 aaPredicted RBP31.21■■■□□ 2.59
SSBP3-202ENST00000357475 ZBTB47Q9UFB7 747 aaPredicted RBP31.21■■■□□ 2.59
SSBP3-202ENST00000357475 NFKBIEO00221 500 aa31.2■■■□□ 2.59
SSBP3-202ENST00000357475 SOGA3Q5TF21 947 aa31.2■■■□□ 2.59
SSBP3-202ENST00000357475 SALL3Q9BXA9 1300 aa31.2■■■□□ 2.59
SSBP3-202ENST00000357475 RIMBP2O15034 1052 aa31.19■■■□□ 2.58
SSBP3-202ENST00000357475 IFIT2P09913 472 aaKnown RBP31.19■■■□□ 2.58
SSBP3-202ENST00000357475 GYG1P46976 350 aa31.19■■■□□ 2.58
SSBP3-202ENST00000357475 TSHZ3Q63HK5 1081 aa31.19■■■□□ 2.58
SSBP3-202ENST00000357475 IFIT1P09914 478 aaKnown RBP31.19■■■□□ 2.58
SSBP3-202ENST00000357475 FKBP4Q02790 459 aaKnown RBP eCLIP31.18■■■□□ 2.58
SSBP3-202ENST00000357475 RASSF7Q02833 373 aa31.18■■■□□ 2.58
SSBP3-202ENST00000357475 BCAMP50895 628 aa31.17■■■□□ 2.58
SSBP3-202ENST00000357475 FAM84BQ96KN1 310 aaPredicted RBP31.17■■■□□ 2.58
SSBP3-202ENST00000357475 PSMD1Q99460 953 aa31.17■■■□□ 2.58
SSBP3-202ENST00000357475 ZNF277Q9NRM2 450 aaPredicted RBP31.17■■■□□ 2.58
SSBP3-202ENST00000357475 CCDC88AQ3V6T2 1871 aa31.17■■■□□ 2.58
SSBP3-202ENST00000357475 MED23Q9ULK4 1368 aa31.17■■■□□ 2.58
SSBP3-202ENST00000357475 COL4A5P29400 1685 aa31.16■■■□□ 2.58
SSBP3-202ENST00000357475 PHKA1P46020 1223 aa31.16■■■□□ 2.58
SSBP3-202ENST00000357475 PRELPP51888 382 aa31.16■■■□□ 2.58
SSBP3-202ENST00000357475 AOC3Q16853 763 aa31.14■■■□□ 2.58
SSBP3-202ENST00000357475 WASHC4Q2M389 1173 aa31.14■■■□□ 2.58
SSBP3-202ENST00000357475 GRIPAP1Q4V328 841 aa31.14■■■□□ 2.58
SSBP3-202ENST00000357475 TAOK3Q9H2K8 898 aa31.14■■■□□ 2.58
SSBP3-202ENST00000357475 CHD4Q14839 1912 aa31.14■■■□□ 2.58
SSBP3-202ENST00000357475 CCDC102BQ68D86 513 aa31.14■■■□□ 2.57
SSBP3-202ENST00000357475 ARHGAP27Q6ZUM4 889 aa31.14■■■□□ 2.57
SSBP3-202ENST00000357475 C15orf52Q6ZUT6 534 aaKnown RBP31.14■■■□□ 2.57
SSBP3-202ENST00000357475 PLEKHM2Q8IWE5 1019 aa31.14■■■□□ 2.57
SSBP3-202ENST00000357475 MX1P20591 662 aa31.13■■■□□ 2.57
SSBP3-202ENST00000357475 FBXO33Q7Z6M2 555 aa31.13■■■□□ 2.57
SSBP3-202ENST00000357475 GPR162Q16538 588 aa31.12■■■□□ 2.57
SSBP3-202ENST00000357475 GORABQ5T7V8 394 aa31.12■■■□□ 2.57
SSBP3-202ENST00000357475 ZC3H12CQ9C0D7 883 aaKnown RBP31.12■■■□□ 2.57
SSBP3-202ENST00000357475 IQSEC3Q9UPP2 1182 aaPredicted RBP31.12■■■□□ 2.57
SSBP3-202ENST00000357475 SBF1O95248 1867 aa31.12■■■□□ 2.57
SSBP3-202ENST00000357475 AKAP11Q9UKA4 1901 aa31.11■■■□□ 2.57
SSBP3-202ENST00000357475 MYH13Q9UKX3 1938 aa31.11■■■□□ 2.57
SSBP3-202ENST00000357475 DOK7Q18PE1 504 aa31.11■■■□□ 2.57
SSBP3-202ENST00000357475 SUPT20HQ8NEM7 779 aa31.11■■■□□ 2.57
SSBP3-202ENST00000357475 EYA3Q99504 573 aa31.11■■■□□ 2.57
SSBP3-202ENST00000357475 HIBADHP31937 336 aaKnown RBP31.1■■■□□ 2.57
SSBP3-202ENST00000357475 RGS3P49796 1198 aa31.1■■■□□ 2.57
SSBP3-202ENST00000357475 PDE1AP54750 535 aa31.1■■■□□ 2.57
SSBP3-202ENST00000357475 KIAA2012Q0VF49 1180 aa31.1■■■□□ 2.57
SSBP3-202ENST00000357475 SCARF1Q14162 830 aa31.1■■■□□ 2.57
SSBP3-202ENST00000357475 PPIP5K2O43314 1243 aa31.09■■■□□ 2.57
SSBP3-202ENST00000357475 CAVIN4Q5BKX8 364 aa31.09■■■□□ 2.57
SSBP3-202ENST00000357475 ECHDC1Q9NTX5 307 aa31.09■■■□□ 2.57
SSBP3-202ENST00000357475 LTBP3Q9NS15 1303 aa31.09■■■□□ 2.57
SSBP3-202ENST00000357475 DBNDD1Q9H9R9 158 aa31.08■■■□□ 2.57
SSBP3-202ENST00000357475 COL1A1P02452 1464 aaPredicted RBP31.08■■■□□ 2.57
SSBP3-202ENST00000357475 SCN9AQ15858 1988 aa31.08■■■□□ 2.57
SSBP3-202ENST00000357475 IARSP41252 1262 aaKnown RBP31.08■■■□□ 2.57
SSBP3-202ENST00000357475 TTC39AQ5SRH9 613 aa31.08■■■□□ 2.57
SSBP3-202ENST00000357475 PI4K2BQ8TCG2 481 aa31.08■■■□□ 2.57
SSBP3-202ENST00000357475 STAP2Q9UGK3 403 aa31.08■■■□□ 2.57
SSBP3-202ENST00000357475 NDUFB9Q9Y6M9 179 aa31.08■■■□□ 2.57
SSBP3-202ENST00000357475 CCDC158Q5M9N0 1113 aa31.07■■■□□ 2.56
SSBP3-202ENST00000357475 PI16Q6UXB8 463 aa31.07■■■□□ 2.56
SSBP3-202ENST00000357475 VPS37DQ86XT2 251 aa31.07■■■□□ 2.56
SSBP3-202ENST00000357475 CD209Q9NNX6 404 aa31.07■■■□□ 2.56
SSBP3-202ENST00000357475 ZNF804AQ7Z570 1209 aa31.06■■■□□ 2.56
SSBP3-202ENST00000357475 ARID4AP29374 1257 aaPredicted RBP31.05■■■□□ 2.56
SSBP3-202ENST00000357475 MCAMP43121 646 aa31.05■■■□□ 2.56
SSBP3-202ENST00000357475 RASGRF1Q13972 1273 aa31.04■■■□□ 2.56
SSBP3-202ENST00000357475 LARGE2Q8N3Y3 721 aa31.04■■■□□ 2.56
SSBP3-202ENST00000357475 KCNQ5Q9NR82 932 aa31.04■■■□□ 2.56
SSBP3-202ENST00000357475 ZNF646O15015 1829 aaPredicted RBP31.04■■■□□ 2.56
SSBP3-202ENST00000357475 TTC41PQ6P2S7 1318 aa31.04■■■□□ 2.56
SSBP3-202ENST00000357475 ATP5JP18859 108 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 BOLA2Q9H3K6 86 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 SNRKQ9NRH2 765 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 JAG2Q9Y219 1238 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 DICER1Q9UPY3 1922 aaKnown RBP31.03■■■□□ 2.56
SSBP3-202ENST00000357475 ECE2O60344 883 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 TDRD7Q8NHU6 1098 aaKnown RBP31.03■■■□□ 2.56
SSBP3-202ENST00000357475 GPATCH3Q96I76 525 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 COA1Q9GZY4 146 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 OSBPL3Q9H4L5 887 aa31.03■■■□□ 2.56
SSBP3-202ENST00000357475 YDJCA8MPS7 323 aa31.02■■■□□ 2.56
SSBP3-202ENST00000357475 IL1R1P14778 569 aa31.02■■■□□ 2.56
SSBP3-202ENST00000357475 HMG20BQ9P0W2 317 aa31.02■■■□□ 2.56
SSBP3-202ENST00000357475 MYO5AQ9Y4I1 1855 aaKnown RBP31.01■■■□□ 2.56
SSBP3-202ENST00000357475 MAP4K4O95819 1239 aaPredicted RBP31.01■■■□□ 2.55
SSBP3-202ENST00000357475 EDC3Q96F86 508 aaKnown RBP31.01■■■□□ 2.55
SSBP3-202ENST00000357475 ZNF512BQ96KM6 892 aaPredicted RBP31.01■■■□□ 2.55
SSBP3-202ENST00000357475 UQCRFS1P1P0C7P4 283 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms