RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MYO1BO43795 1136 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 HSF2BPO75031 334 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 IL13P35225 146 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 EVCP57679 992 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 GOPCQ9HD26 462 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 TSPY2A6NKD2 308 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 IPO4Q8TEX9 1081 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-202ENST00000357207 HSPA4P34932 840 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 LEO1Q8WVC0 666 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 BBXQ8WY36 941 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 DHX58Q96C10 678 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 TEX13AQ9BXU3 409 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 RNF113AO15541 343 aaKnown RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 SSR1P43307 286 aaKnown RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 PUF60Q9UHX1 559 aaKnown RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 RIMS2Q9UQ26 1411 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 PSMA7O14818 248 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 SLC27A2O14975 620 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 PHACTR2O75167 634 aa17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 GBP2P32456 591 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-202ENST00000357207 ZNF569Q5MCW4 686 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 ESR2Q92731 530 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 GSTTP1A0A1W2PQM5 241 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 STX17P56962 302 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 GABPB1Q06547 395 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 PKP1Q13835 747 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 SMC1AQ14683 1233 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 TCERG1LQ5VWI1 586 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 KRT86O43790 486 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 PDE4BQ07343 736 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 NUTM2AQ8IVF1 878 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 BAG1Q99933 345 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 VPS18Q9P253 973 aa17.79■□□□□ 0.44
TRAPPC11-202ENST00000357207 GCOM1H8Y6P7 765 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 MYZAPP0CAP1 466 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 TACC1O75410 805 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 KRT83P78385 493 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 GPATCH11Q8N954 259 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 EXOC1Q9NV70 894 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 PTPRTO14522 1441 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 EZRP15311 586 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 STAT6P42226 847 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 TFCP2Q12800 502 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 TSC1Q92574 1164 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 MAP3K5Q99683 1374 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 RBM5P52756 815 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 KIF5AQ12840 1032 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 DRC1Q96MC2 740 aa17.78■□□□□ 0.44
TRAPPC11-202ENST00000357207 ZNF521Q96K83 1311 aa17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 DTNBO60941 627 aa17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 LLPHQ9BRT6 129 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 RHOXF2BP0C7M4 288 aa17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 RHOXF2Q9BQY4 288 aa17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
TRAPPC11-202ENST00000357207 ELP1O95163 1332 aa17.77■□□□□ 0.43
TRAPPC11-202ENST00000357207 OPA1O60313 960 aa17.77■□□□□ 0.43
TRAPPC11-202ENST00000357207 PPP2R3AQ06190 1150 aa17.77■□□□□ 0.43
TRAPPC11-202ENST00000357207 PRPF4BQ13523 1007 aaKnown RBP17.77■□□□□ 0.43
TRAPPC11-202ENST00000357207 GUCA1BQ9UMX6 200 aa17.77■□□□□ 0.43
TRAPPC11-202ENST00000357207 ABCC1P33527 1531 aa17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 BICC1Q9H694 974 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 ABCC4O15439 1325 aa17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 EBAG9O00559 213 aa17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 ELF2Q15723 593 aa17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 TM6SF1Q9BZW5 370 aa17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 FAM227BQ96M60 508 aa17.76■□□□□ 0.43
TRAPPC11-202ENST00000357207 MPHOSPH10O00566 681 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 VAT1LQ9HCJ6 419 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 GTF2A1P52655 376 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 CNGA4Q8IV77 575 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 ATRIPQ8WXE1 791 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 CCDC42Q96M95 316 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 CDC5LQ99459 802 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 SLC4A4Q9Y6R1 1079 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 GOLGA6L10A0A0M3HER8 536 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 SPAG5Q96R06 1193 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 CARD6Q9BX69 1037 aa17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 DDX21Q9NR30 783 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRAPPC11-202ENST00000357207 KIF24Q5T7B8 1368 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 IFI16Q16666 785 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 HDXQ7Z353 690 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 NBPF11Q86T75 865 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 C10orf67Q8IYJ2 551 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms