RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 USP17L1Q7RTZ2 530 aa25.38■■□□□ 1.65
HCFC1R1-202ENST00000354679 FRAT1Q92837 279 aaPredicted RBP25.38■■□□□ 1.65
HCFC1R1-202ENST00000354679 PUS3Q9BZE2 481 aaKnown RBP25.38■■□□□ 1.65
HCFC1R1-202ENST00000354679 PLIN1O60240 522 aa25.37■■□□□ 1.65
HCFC1R1-202ENST00000354679 INTS3Q68E01 1043 aaKnown RBP25.37■■□□□ 1.65
HCFC1R1-202ENST00000354679 ATF7IPQ6VMQ6 1270 aa25.37■■□□□ 1.65
HCFC1R1-202ENST00000354679 ZNF609O15014 1411 aa25.37■■□□□ 1.65
HCFC1R1-202ENST00000354679 TRIM27P14373 513 aa25.36■■□□□ 1.65
HCFC1R1-202ENST00000354679 HIRAP54198 1017 aaPredicted RBP25.36■■□□□ 1.65
HCFC1R1-202ENST00000354679 AGBL3Q8NEM8 1001 aa25.36■■□□□ 1.65
HCFC1R1-202ENST00000354679 IRS2Q9Y4H2 1338 aa25.36■■□□□ 1.65
HCFC1R1-202ENST00000354679 C15orf52Q6ZUT6 534 aaKnown RBP25.35■■□□□ 1.65
HCFC1R1-202ENST00000354679 SAMD7Q7Z3H4 446 aa25.35■■□□□ 1.65
HCFC1R1-202ENST00000354679 CREBZFQ9NS37 354 aa25.35■■□□□ 1.65
HCFC1R1-202ENST00000354679 TBC1D10BQ4KMP7 808 aaPredicted RBP25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 ZC3H15Q8WU90 426 aaKnown RBP25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 FBXW7Q969H0 707 aa25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 KLRG1Q96E93 195 aa25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 HDAC5Q9UQL6 1122 aa25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 TNNQ9UQP3 1299 aa25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 RIPOR2Q9Y4F9 1068 aa25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 MROH5Q6ZUA9 1318 aa25.34■■□□□ 1.65
HCFC1R1-202ENST00000354679 STRIP1Q5VSL9 837 aa25.33■■□□□ 1.65
HCFC1R1-202ENST00000354679 GMLQ99445 158 aa25.33■■□□□ 1.65
HCFC1R1-202ENST00000354679 MEIS3Q99687 375 aa25.33■■□□□ 1.65
HCFC1R1-202ENST00000354679 CD209Q9NNX6 404 aa25.33■■□□□ 1.65
HCFC1R1-202ENST00000354679 PGAP2Q9UHJ9 254 aa25.33■■□□□ 1.65
HCFC1R1-202ENST00000354679 EGFRP00533 1210 aa25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 LRRC24Q50LG9 513 aa25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 DACT2Q5SW24 774 aa25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 RBM26Q5T8P6 1007 aaKnown RBP25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 KLHDC4Q8TBB5 520 aa25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 LRRFIP2Q9Y608 721 aaKnown RBP25.32■■□□□ 1.64
HCFC1R1-202ENST00000354679 TMEM88BA6NKF7 163 aa25.31■■□□□ 1.64
HCFC1R1-202ENST00000354679 RFX5P48382 616 aaPredicted RBP25.31■■□□□ 1.64
HCFC1R1-202ENST00000354679 UBE4AQ14139 1066 aa25.31■■□□□ 1.64
HCFC1R1-202ENST00000354679 ZNF804AQ7Z570 1209 aa25.31■■□□□ 1.64
HCFC1R1-202ENST00000354679 CLUAP1Q96AJ1 413 aa25.31■■□□□ 1.64
HCFC1R1-202ENST00000354679 ZNF280AP59817 542 aaPredicted RBP25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 KIF4BQ2VIQ3 1234 aa25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 METTL24Q5JXM2 366 aa25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 TTLL5Q6EMB2 1281 aa25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 MXD3Q9BW11 206 aa25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 MYO3BQ8WXR4 1341 aa25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 ZNF646O15015 1829 aaPredicted RBP25.3■■□□□ 1.64
HCFC1R1-202ENST00000354679 GNAI3P08754 354 aa25.29■■□□□ 1.64
HCFC1R1-202ENST00000354679 USP17L8P0C7I0 530 aa25.29■■□□□ 1.64
HCFC1R1-202ENST00000354679 GLIS2Q9BZE0 524 aaPredicted RBP25.29■■□□□ 1.64
HCFC1R1-202ENST00000354679 TRAF5O00463 557 aa25.28■■□□□ 1.64
HCFC1R1-202ENST00000354679 GTF2IP78347 998 aa25.28■■□□□ 1.64
HCFC1R1-202ENST00000354679 PTPN12Q05209 780 aaKnown RBP25.28■■□□□ 1.64
HCFC1R1-202ENST00000354679 FMR1Q06787 632 aaKnown RBP eCLIP25.28■■□□□ 1.64
HCFC1R1-202ENST00000354679 IL1R1P14778 569 aa25.27■■□□□ 1.64
HCFC1R1-202ENST00000354679 EYA2O00167 538 aa25.26■■□□□ 1.63
HCFC1R1-202ENST00000354679 CDC37L1Q7L3B6 337 aa25.26■■□□□ 1.63
HCFC1R1-202ENST00000354679 VGLL2Q8N8G2 317 aa25.26■■□□□ 1.63
HCFC1R1-202ENST00000354679 MYOZ2Q9NPC6 264 aa25.26■■□□□ 1.63
HCFC1R1-202ENST00000354679 PDE8BO95263 885 aa25.25■■□□□ 1.63
HCFC1R1-202ENST00000354679 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
HCFC1R1-202ENST00000354679 GYG1P46976 350 aa25.24■■□□□ 1.63
HCFC1R1-202ENST00000354679 OGFOD1Q8N543 542 aa25.24■■□□□ 1.63
HCFC1R1-202ENST00000354679 MKRN1Q9UHC7 482 aaKnown RBP25.24■■□□□ 1.63
HCFC1R1-202ENST00000354679 HIBADHP31937 336 aaKnown RBP25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 USP48Q86UV5 1035 aa25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 FTSJ3Q8IY81 847 aaKnown RBP25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 JMYQ8N9B5 988 aa25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 DCPSQ96C86 337 aaKnown RBP25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 FAM84BQ96KN1 310 aaPredicted RBP25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 SIL1Q9H173 461 aa25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 FBXO3Q9UK99 471 aa25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 TRPM7Q96QT4 1865 aa25.23■■□□□ 1.63
HCFC1R1-202ENST00000354679 PCNTO95613 3336 aa25.22■■□□□ 1.63
HCFC1R1-202ENST00000354679 CNTNAP1P78357 1384 aa25.22■■□□□ 1.63
HCFC1R1-202ENST00000354679 SCARF1Q14162 830 aa25.22■■□□□ 1.63
HCFC1R1-202ENST00000354679 ATG9AQ7Z3C6 839 aa25.22■■□□□ 1.63
HCFC1R1-202ENST00000354679 KRT26Q7Z3Y9 468 aa25.22■■□□□ 1.63
HCFC1R1-202ENST00000354679 GGA3Q9NZ52 723 aa25.22■■□□□ 1.63
HCFC1R1-202ENST00000354679 ASTN2O75129 1339 aaPredicted RBP25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 GNAI2P04899 355 aa25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 MMP14P50281 582 aa25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 PUM3Q15397 648 aaKnown RBP25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 CST9Q5W186 159 aa25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 KIAA0825Q8IV33 1275 aa25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 DZIP1LQ8IYY4 767 aaKnown RBP25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 ABT1Q9ULW3 272 aaKnown RBP25.21■■□□□ 1.63
HCFC1R1-202ENST00000354679 CIAO1O76071 339 aa25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 SASH1O94885 1247 aa25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 CELF2O95319 508 aaKnown RBP25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 VPS37DQ86XT2 251 aa25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 CERS5Q8N5B7 392 aa25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 TDRD7Q8NHU6 1098 aaKnown RBP25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 HDAC9Q9UKV0 1011 aa25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 PA2G4Q9UQ80 394 aaKnown RBP25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 JAG2Q9Y219 1238 aa25.2■■□□□ 1.62
HCFC1R1-202ENST00000354679 SRGAP3O43295 1099 aa25.19■■□□□ 1.62
HCFC1R1-202ENST00000354679 FGFR2P21802 821 aa25.19■■□□□ 1.62
HCFC1R1-202ENST00000354679 FKBP1AP62942 108 aaKnown RBP25.19■■□□□ 1.62
HCFC1R1-202ENST00000354679 MTX1Q13505 466 aa25.19■■□□□ 1.62
HCFC1R1-202ENST00000354679 FBXO33Q7Z6M2 555 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms