RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CALCOCO1Q9P1Z2 691 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 ANXA1P04083 346 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 NUCB1Q02818 461 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 TACC1O75410 805 aa26.21■■□□□ 1.79
NPAS3-201ENST00000346562 ZC3H12CQ9C0D7 883 aaKnown RBP26.21■■□□□ 1.79
NPAS3-201ENST00000346562 EEF2P13639 858 aaKnown RBP26.21■■□□□ 1.79
NPAS3-201ENST00000346562 LMBR1LQ6UX01 489 aa26.21■■□□□ 1.79
NPAS3-201ENST00000346562 RTCBQ9Y3I0 505 aaKnown RBP26.21■■□□□ 1.79
NPAS3-201ENST00000346562 TTC16Q8NEE8 873 aa26.21■■□□□ 1.79
NPAS3-201ENST00000346562 TNNI2P48788 182 aa26.2■■□□□ 1.79
NPAS3-201ENST00000346562 C8orf37Q96NL8 207 aa26.2■■□□□ 1.79
NPAS3-201ENST00000346562 CTAGE15A4D2H0 777 aa26.2■■□□□ 1.79
NPAS3-201ENST00000346562 CTAGE8P0CG41 777 aa26.2■■□□□ 1.79
NPAS3-201ENST00000346562 CTAGE6Q86UF2 777 aa26.2■■□□□ 1.79
NPAS3-201ENST00000346562 CTAGE4Q8IX94 777 aa26.2■■□□□ 1.79
NPAS3-201ENST00000346562 LMOD1P29536 600 aaPredicted RBP26.2■■□□□ 1.78
NPAS3-201ENST00000346562 NECAB1Q8N987 351 aa26.2■■□□□ 1.78
NPAS3-201ENST00000346562 TMX3Q96JJ7 454 aa26.2■■□□□ 1.78
NPAS3-201ENST00000346562 PPIP5K1Q6PFW1 1433 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 TRIM75PA6NK02 468 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 TAF12Q16514 161 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 SIRT1Q96EB6 747 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 CEP83Q9Y592 693 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 BMS1Q14692 1282 aaKnown RBP26.19■■□□□ 1.78
NPAS3-201ENST00000346562 FBF1Q8TES7 1133 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 IL2RBP14784 551 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 GJC1P36383 396 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 MXRA7P84157 204 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 FAM212AQ96EL1 285 aa26.19■■□□□ 1.78
NPAS3-201ENST00000346562 HDAC1Q13547 482 aaPredicted RBP26.18■■□□□ 1.78
NPAS3-201ENST00000346562 RNF113AO15541 343 aaKnown RBP26.18■■□□□ 1.78
NPAS3-201ENST00000346562 KRT83P78385 493 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 KIAA1524Q8TCG1 905 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 CCDC50Q8IVM0 306 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 CCDC117Q8IWD4 279 aaPredicted RBP26.18■■□□□ 1.78
NPAS3-201ENST00000346562 PLCD3Q8N3E9 789 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 RBM17Q96I25 401 aaKnown RBP26.18■■□□□ 1.78
NPAS3-201ENST00000346562 SH2D4AQ9H788 454 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 DPH6Q7L8W6 267 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 LRRC2Q9BYS8 371 aa26.18■■□□□ 1.78
NPAS3-201ENST00000346562 GNA11P29992 359 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 HS2ST1Q7LGA3 356 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 TFCP2L1Q9NZI6 479 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 ATP8B2P98198 1209 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 MCM9Q9NXL9 1143 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 SDSP20132 328 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 PAIP2Q9BPZ3 127 aaKnown RBP26.17■■□□□ 1.78
NPAS3-201ENST00000346562 KLHL40Q2TBA0 621 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 DHX58Q96C10 678 aa26.17■■□□□ 1.78
NPAS3-201ENST00000346562 PUS7Q96PZ0 661 aaKnown RBP26.17■■□□□ 1.78
NPAS3-201ENST00000346562 TMEM110-MUSTN1A8MSY1 372 aa26.16■■□□□ 1.78
NPAS3-201ENST00000346562 ESYT1Q9BSJ8 1104 aa26.16■■□□□ 1.78
NPAS3-201ENST00000346562 ZSCAN23Q3MJ62 389 aa26.16■■□□□ 1.78
NPAS3-201ENST00000346562 ANO6Q4KMQ2 910 aa26.16■■□□□ 1.78
NPAS3-201ENST00000346562 RBM28Q9NW13 759 aaKnown RBP26.16■■□□□ 1.78
NPAS3-201ENST00000346562 RTL1A6NKG5 1358 aa26.16■■□□□ 1.78
NPAS3-201ENST00000346562 CCDC63Q8NA47 563 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 LDHBP07195 334 aaKnown RBP26.15■■□□□ 1.78
NPAS3-201ENST00000346562 RBM26Q5T8P6 1007 aaKnown RBP26.15■■□□□ 1.78
NPAS3-201ENST00000346562 ZSWIM4Q9H7M6 989 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 TTC41PQ6P2S7 1318 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 SLC39A6Q13433 755 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 GIMAP6Q6P9H5 292 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 TTC14Q96N46 770 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 PDE1AP54750 535 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 FMNL3Q8IVF7 1028 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 NEK11Q8NG66 645 aa26.15■■□□□ 1.78
NPAS3-201ENST00000346562 NMIQ13287 307 aaPredicted RBP26.14■■□□□ 1.78
NPAS3-201ENST00000346562 CCDC14Q49A88 953 aa26.14■■□□□ 1.78
NPAS3-201ENST00000346562 MAGEB6Q8N7X4 407 aa26.14■■□□□ 1.77
NPAS3-201ENST00000346562 MEIS3Q99687 375 aa26.14■■□□□ 1.77
NPAS3-201ENST00000346562 DISP3Q9P2K9 1392 aa26.14■■□□□ 1.77
NPAS3-201ENST00000346562 GTF2F1P35269 517 aaKnown RBP eCLIP26.13■■□□□ 1.77
NPAS3-201ENST00000346562 CNPY2Q9Y2B0 182 aa26.13■■□□□ 1.77
NPAS3-201ENST00000346562 OPA1O60313 960 aa26.13■■□□□ 1.77
NPAS3-201ENST00000346562 ATP2A2P16615 1042 aaKnown RBP26.13■■□□□ 1.77
NPAS3-201ENST00000346562 MARCKSP29966 332 aaPredicted RBP26.13■■□□□ 1.77
NPAS3-201ENST00000346562 IRS4O14654 1257 aaPredicted RBP26.13■■□□□ 1.77
NPAS3-201ENST00000346562 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
NPAS3-201ENST00000346562 TBC1D32Q96NH3 1257 aa26.12■■□□□ 1.77
NPAS3-201ENST00000346562 KDM5BQ9UGL1 1544 aa26.12■■□□□ 1.77
NPAS3-201ENST00000346562 SLU7O95391 586 aaKnown RBP26.12■■□□□ 1.77
NPAS3-201ENST00000346562 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.12■■□□□ 1.77
NPAS3-201ENST00000346562 SERPINA10Q9UK55 444 aa26.12■■□□□ 1.77
NPAS3-201ENST00000346562 HSPA4P34932 840 aa26.12■■□□□ 1.77
NPAS3-201ENST00000346562 TUBB4AP04350 444 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 PLCB3Q01970 1234 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 ANKRD44Q8N8A2 993 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 SPTLC2O15270 562 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 KRT86O43790 486 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 SNX16P57768 344 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 AOPEPQ8N6M6 819 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 ZBTB21Q9ULJ3 1066 aa26.11■■□□□ 1.77
NPAS3-201ENST00000346562 TEX14Q8IWB6 1497 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 CTAGE9A4FU28 777 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 RIMBP2O15034 1052 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 KIF5AQ12840 1032 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms