RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
RTL6-201ENST00000341255 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
RTL6-201ENST00000341255 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
RTL6-201ENST00000341255 ERMNQ8TAM6 284 aa18.49■□□□□ 0.55
RTL6-201ENST00000341255 SPTLC2O15270 562 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 TBCAO75347 108 aaKnown RBP18.48■□□□□ 0.55
RTL6-201ENST00000341255 TRAF1Q13077 416 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 GOLGA1Q92805 767 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 PAG1Q9NWQ8 432 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 SAMM50Q9Y512 469 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 NAA16Q6N069 864 aaPredicted RBP18.48■□□□□ 0.55
RTL6-201ENST00000341255 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
RTL6-201ENST00000341255 USP26Q9BXU7 913 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 GTPBP4Q9BZE4 634 aaKnown RBP18.48■□□□□ 0.55
RTL6-201ENST00000341255 SPAG1Q07617 926 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.55
RTL6-201ENST00000341255 IGSF3O75054 1194 aa18.48■□□□□ 0.55
RTL6-201ENST00000341255 RAPGEF6Q8TEU7 1601 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 CTAGE9A4FU28 777 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 ATP6V1AP38606 617 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 RRAGDQ9NQL2 400 aaPredicted RBP18.47■□□□□ 0.55
RTL6-201ENST00000341255 IQSEC3Q9UPP2 1182 aaPredicted RBP18.47■□□□□ 0.55
RTL6-201ENST00000341255 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
RTL6-201ENST00000341255 TRMT1LQ7Z2T5 733 aaKnown RBP18.47■□□□□ 0.55
RTL6-201ENST00000341255 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 CTNNA2P26232 953 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 PRC1O43663 620 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 STAT6P42226 847 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 SYT10Q6XYQ8 523 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 RBSNQ9H1K0 784 aa18.47■□□□□ 0.55
RTL6-201ENST00000341255 CAPN2P17655 700 aa18.46■□□□□ 0.55
RTL6-201ENST00000341255 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
RTL6-201ENST00000341255 IFI16Q16666 785 aaKnown RBP18.46■□□□□ 0.55
RTL6-201ENST00000341255 IFNKQ9P0W0 207 aa18.46■□□□□ 0.55
RTL6-201ENST00000341255 TESK2Q96S53 571 aa18.46■□□□□ 0.54
RTL6-201ENST00000341255 NIP7Q9Y221 180 aaKnown RBP eCLIP18.46■□□□□ 0.54
RTL6-201ENST00000341255 NPATQ14207 1427 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 ZBTB9Q96C00 473 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 KARSQ15046 597 aaKnown RBP18.45■□□□□ 0.54
RTL6-201ENST00000341255 CHMLP26374 656 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 SYCP2Q9BX26 1530 aa18.45■□□□□ 0.54
RTL6-201ENST00000341255 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 CCDC172P0C7W6 258 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 DHX58Q96C10 678 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 UTP14AQ9BVJ6 771 aaKnown RBP18.44■□□□□ 0.54
RTL6-201ENST00000341255 FSD2A1L4K1 749 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
RTL6-201ENST00000341255 GNAT2P19087 354 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 CCDC174Q6PII3 467 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 HSPA4P34932 840 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 SPAG5Q96R06 1193 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 LZTFL1Q9NQ48 299 aa18.44■□□□□ 0.54
RTL6-201ENST00000341255 RNF113AO15541 343 aaKnown RBP18.43■□□□□ 0.54
RTL6-201ENST00000341255 HEATR3Q7Z4Q2 680 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 ATRIPQ8WXE1 791 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 ASXL2Q76L83 1435 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 APOBRQ0VD83 1088 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 RUFY3Q7L099 469 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 CHST3Q7LGC8 479 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 VPS18Q9P253 973 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 PUF60Q9UHX1 559 aaKnown RBP18.43■□□□□ 0.54
RTL6-201ENST00000341255 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 PSMA7O14818 248 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 TACC1O75410 805 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
RTL6-201ENST00000341255 TRIM75PA6NK02 468 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 OPA1O60313 960 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 CALM1P0DP23 149 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 CALM2P0DP24 149 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 CALM3P0DP25 149 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 IL2RBP14784 551 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 GTF2A1P52655 376 aaPredicted RBP18.43■□□□□ 0.54
RTL6-201ENST00000341255 OGFRQ9NZT2 677 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 CWF19L2Q2TBE0 894 aaKnown RBP18.43■□□□□ 0.54
RTL6-201ENST00000341255 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
RTL6-201ENST00000341255 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
RTL6-201ENST00000341255 NF2P35240 595 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 BBXQ8WY36 941 aaPredicted RBP18.42■□□□□ 0.54
RTL6-201ENST00000341255 FERMT2Q96AC1 680 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 DDB1Q16531 1140 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
RTL6-201ENST00000341255 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 EYA1Q99502 592 aa18.42■□□□□ 0.54
RTL6-201ENST00000341255 MAGEB6P1A0A0J9YX57 407 aa18.41■□□□□ 0.54
RTL6-201ENST00000341255 CAPZA3Q96KX2 299 aa18.41■□□□□ 0.54
RTL6-201ENST00000341255 RAD50Q92878 1312 aa18.41■□□□□ 0.54
RTL6-201ENST00000341255 CALML3P27482 149 aa18.41■□□□□ 0.54
RTL6-201ENST00000341255 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
RTL6-201ENST00000341255 PHACTR2O75167 634 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms