RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
ATXN3-201ENST00000340660 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
ATXN3-201ENST00000340660 ST20-MTHFSA0A0A6YYL1 179 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 MTHFSP49914 203 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 CAP1Q01518 475 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 AOC3Q16853 763 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 SAMD7Q7Z3H4 446 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
ATXN3-201ENST00000340660 RPTORQ8N122 1335 aa15.69■□□□□ 0.1
ATXN3-201ENST00000340660 PRSS12P56730 875 aa15.69■□□□□ 0.1
ATXN3-201ENST00000340660 CC2D2BQ6DHV5 1058 aa15.69■□□□□ 0.1
ATXN3-201ENST00000340660 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
ATXN3-201ENST00000340660 STAP2Q9UGK3 403 aa15.69■□□□□ 0.1
ATXN3-201ENST00000340660 ZNRF3Q9ULT6 936 aa15.69■□□□□ 0.1
ATXN3-201ENST00000340660 POLR2AP24928 1970 aaKnown RBP15.69■□□□□ 0.1
ATXN3-201ENST00000340660 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 TMEM265A0A087WTH1 108 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 MYCP01106 439 aaPredicted RBP15.68■□□□□ 0.1
ATXN3-201ENST00000340660 MOB2Q70IA6 237 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 PACS2Q86VP3 889 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 NBPF5PQ86XG9 351 aaPredicted RBP15.68■□□□□ 0.1
ATXN3-201ENST00000340660 CD99L2Q8TCZ2 262 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 SHISA4Q96DD7 197 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 CDCA5Q96FF9 252 aa15.68■□□□□ 0.1
ATXN3-201ENST00000340660 H7C1D1 291 aa15.67■□□□□ 0.1
ATXN3-201ENST00000340660 RAD17O75943 681 aa15.67■□□□□ 0.1
ATXN3-201ENST00000340660 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
ATXN3-201ENST00000340660 MAP3K12Q12852 859 aa15.67■□□□□ 0.1
ATXN3-201ENST00000340660 SLC39A6Q13433 755 aa15.67■□□□□ 0.1
ATXN3-201ENST00000340660 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
ATXN3-201ENST00000340660 WASHC2AQ641Q2 1341 aa15.67■□□□□ 0.1
ATXN3-201ENST00000340660 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
ATXN3-201ENST00000340660 NR2E3Q9Y5X4 410 aa15.66■□□□□ 0.1
ATXN3-201ENST00000340660 PIEZO1Q92508 2521 aa15.66■□□□□ 0.1
ATXN3-201ENST00000340660 GUCD1Q96NT3 240 aa15.65■□□□□ 0.1
ATXN3-201ENST00000340660 EFCC1Q9HA90 598 aa15.65■□□□□ 0.1
ATXN3-201ENST00000340660 C3orf80F5H4A9 247 aa15.64■□□□□ 0.09
ATXN3-201ENST00000340660 PPM1GO15355 546 aaPredicted RBP15.64■□□□□ 0.09
ATXN3-201ENST00000340660 SREBF2Q12772 1141 aa15.64■□□□□ 0.09
ATXN3-201ENST00000340660 UBE2Q1Q7Z7E8 422 aa15.64■□□□□ 0.09
ATXN3-201ENST00000340660 ERO1AQ96HE7 468 aa15.64■□□□□ 0.09
ATXN3-201ENST00000340660 ZNF330Q9Y3S2 320 aaPredicted RBP15.64■□□□□ 0.09
ATXN3-201ENST00000340660 TNFRSF10AO00220 468 aa15.63■□□□□ 0.09
ATXN3-201ENST00000340660 MLLT3P42568 568 aaPredicted RBP15.63■□□□□ 0.09
ATXN3-201ENST00000340660 FKBP1BP68106 108 aa15.63■□□□□ 0.09
ATXN3-201ENST00000340660 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
ATXN3-201ENST00000340660 SLC9C1Q4G0N8 1177 aa15.63■□□□□ 0.09
ATXN3-201ENST00000340660 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
ATXN3-201ENST00000340660 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
ATXN3-201ENST00000340660 UBE2Q2LH0YL09 131 aa15.62■□□□□ 0.09
ATXN3-201ENST00000340660 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
ATXN3-201ENST00000340660 HTATIP2Q9BUP3 242 aa15.62■□□□□ 0.09
ATXN3-201ENST00000340660 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
ATXN3-201ENST00000340660 ASTN2O75129 1339 aaPredicted RBP15.62■□□□□ 0.09
ATXN3-201ENST00000340660 SMAPO00193 183 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 TNIP1Q15025 636 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 LRIT3Q3SXY7 679 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 NBPF11Q86T75 865 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 SULF1Q8IWU6 871 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 SYMPKQ92797 1274 aaKnown RBP15.61■□□□□ 0.09
ATXN3-201ENST00000340660 RAB3GAP2Q9H2M9 1393 aa15.61■□□□□ 0.09
ATXN3-201ENST00000340660 KDM3BQ7LBC6 1761 aa15.6■□□□□ 0.09
ATXN3-201ENST00000340660 CRY2Q49AN0 593 aa15.6■□□□□ 0.09
ATXN3-201ENST00000340660 NPDC1Q9NQX5 325 aaPredicted RBP15.6■□□□□ 0.09
ATXN3-201ENST00000340660 GGA3Q9NZ52 723 aa15.6■□□□□ 0.09
ATXN3-201ENST00000340660 PRAMEF22A3QJZ6 481 aa15.59■□□□□ 0.09
ATXN3-201ENST00000340660 YDJCA8MPS7 323 aa15.59■□□□□ 0.09
ATXN3-201ENST00000340660 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
ATXN3-201ENST00000340660 RBM26Q5T8P6 1007 aaKnown RBP15.59■□□□□ 0.09
ATXN3-201ENST00000340660 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
ATXN3-201ENST00000340660 SLC52A2Q9HAB3 445 aa15.59■□□□□ 0.09
ATXN3-201ENST00000340660 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.59■□□□□ 0.09
ATXN3-201ENST00000340660 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
ATXN3-201ENST00000340660 BMP8BP34820 402 aa15.58■□□□□ 0.08
ATXN3-201ENST00000340660 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
ATXN3-201ENST00000340660 DPF2Q92785 391 aa15.58■□□□□ 0.08
ATXN3-201ENST00000340660 PUS7Q96PZ0 661 aaKnown RBP15.58■□□□□ 0.08
ATXN3-201ENST00000340660 GDF15Q99988 308 aa15.58■□□□□ 0.08
ATXN3-201ENST00000340660 STARD3NLO95772 234 aa15.57■□□□□ 0.08
ATXN3-201ENST00000340660 IL6STP40189 918 aaPredicted RBP15.57■□□□□ 0.08
ATXN3-201ENST00000340660 EIF4A2Q14240 407 aaKnown RBP15.57■□□□□ 0.08
ATXN3-201ENST00000340660 AMOTQ4VCS5 1084 aa15.57■□□□□ 0.08
ATXN3-201ENST00000340660 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
ATXN3-201ENST00000340660 SH3TC2Q8TF17 1288 aa15.57■□□□□ 0.08
ATXN3-201ENST00000340660 TATDN2Q93075 761 aa15.57■□□□□ 0.08
ATXN3-201ENST00000340660 NYAP1Q6ZVC0 841 aa15.56■□□□□ 0.08
ATXN3-201ENST00000340660 ABCC12Q96J65 1359 aa15.55■□□□□ 0.08
ATXN3-201ENST00000340660 FAM177BA6PVY3 158 aa15.55■□□□□ 0.08
ATXN3-201ENST00000340660 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
ATXN3-201ENST00000340660 PPEF1O14829 653 aaPredicted RBP15.55■□□□□ 0.08
ATXN3-201ENST00000340660 TTC13Q8NBP0 860 aa15.55■□□□□ 0.08
ATXN3-201ENST00000340660 TSR3Q9UJK0 312 aaKnown RBP15.55■□□□□ 0.08
ATXN3-201ENST00000340660 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
ATXN3-201ENST00000340660 IRS2Q9Y4H2 1338 aa15.54■□□□□ 0.08
ATXN3-201ENST00000340660 KIF4BQ2VIQ3 1234 aa15.54■□□□□ 0.08
ATXN3-201ENST00000340660 DZIP3Q86Y13 1208 aaKnown RBP15.54■□□□□ 0.08
ATXN3-201ENST00000340660 RTFDC1Q9BY42 306 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms