RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 GPC6Q9Y625 555 aaPredicted RBP3.22□□□□□ -1.89
CCDC30-201ENST00000340612 CTSHP09668 335 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 VAMP1P23763 118 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 IRX6P78412 446 aaPredicted RBP3.21□□□□□ -1.9
CCDC30-201ENST00000340612 HDLBPQ00341 1268 aaKnown RBP3.21□□□□□ -1.9
CCDC30-201ENST00000340612 EFHC2Q5JST6 749 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 ALG1LQ6GMV1 187 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 SNX29Q8TEQ0 813 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 NAP1L5Q96NT1 182 aaPredicted RBP3.21□□□□□ -1.9
CCDC30-201ENST00000340612 ZFYVE28Q9HCC9 887 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 ATXN7O15265 892 aaPredicted RBP3.21□□□□□ -1.9
CCDC30-201ENST00000340612 EPXP11678 715 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 ACPPP15309 386 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 GNA15P30679 374 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 UBAP2LQ14157 1087 aaKnown RBP3.21□□□□□ -1.9
CCDC30-201ENST00000340612 SLCO4C1Q6ZQN7 724 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 ABHD17AQ96GS6 310 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 OSBPL7Q9BZF2 842 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 USP35Q9P2H5 1018 aa3.21□□□□□ -1.9
CCDC30-201ENST00000340612 FNDC3AQ9Y2H6 1198 aaKnown RBP3.21□□□□□ -1.9
CCDC30-201ENST00000340612 BNIP3LO60238 219 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 TRPA1O75762 1119 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 MAPTP10636 758 aaKnown RBP3.2□□□□□ -1.9
CCDC30-201ENST00000340612 EPB42P16452 691 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 CD33P20138 364 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 CTBSQ01459 385 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 PDE12Q6L8Q7 609 aaKnown RBP3.2□□□□□ -1.9
CCDC30-201ENST00000340612 NLRP8Q86W28 1048 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 SLC30A3Q99726 388 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 PLVAPQ9BX97 442 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 ABI2Q9NYB9 513 aaPredicted RBP3.2□□□□□ -1.9
CCDC30-201ENST00000340612 ZFATQ9P243 1243 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 PIK3R2O00459 728 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 MMP20O60882 483 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 RPLP1P05386 114 aaKnown RBP3.2□□□□□ -1.9
CCDC30-201ENST00000340612 HSP90B1P14625 803 aaKnown RBP3.2□□□□□ -1.9
CCDC30-201ENST00000340612 NFKB1P19838 968 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 MEI1Q5TIA1 1274 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 NXPE4Q6UWF7 544 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 BCCIPQ9P287 314 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCDC30-201ENST00000340612 KCNH4Q9UQ05 1017 aa3.2□□□□□ -1.9
CCDC30-201ENST00000340612 KDM6BO15054 1643 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 NEURL1BA8MQ27 555 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 EFSO43281 561 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 GADD45BO75293 160 aaPredicted RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 BMP4P12644 408 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 CES1P23141 567 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 ERCC5P28715 1186 aaPredicted RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 FANCCQ00597 558 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 TNP2Q05952 138 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 COL13A1Q5TAT6 717 aaPredicted RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 SAMD5Q5TGI4 173 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 XKR5Q6UX68 686 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 CHSY3Q70JA7 882 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 NLRP13Q86W25 1043 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 GSX2Q9BZM3 304 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 DNAJC25Q9H1X3 360 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 NLRP2Q9NX02 1062 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 PCDHGC4Q9Y5F7 938 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 F6X3S4 739 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 SCAMP3O14828 347 aaKnown RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 PAX4O43316 350 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 USP17L7P0C7H9 530 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 RARAP10276 462 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 EIF4BP23588 611 aaKnown RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 TXKP42681 527 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 MLLT1Q03111 559 aaPredicted RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 TTC39BQ5VTQ0 682 aaPredicted RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 METTL16Q86W50 562 aaKnown RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 NT5DC4Q86YG4 428 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 FBF1Q8TES7 1133 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 BHMTQ93088 406 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 NSUN5Q96P11 429 aaKnown RBP3.19□□□□□ -1.9
CCDC30-201ENST00000340612 FMNL2Q96PY5 1086 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 PCDHGB7Q9Y5F8 929 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 AK5Q9Y6K8 562 aa3.19□□□□□ -1.9
CCDC30-201ENST00000340612 FAM157BP0CG42 384 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 SPATA31C1P0DKV0 1188 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 RAD51AP2Q09MP3 1159 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 TBC1D8BQ0IIM8 1120 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 SPEM2Q0P670 501 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 CCINQ13939 588 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 ZNF394Q53GI3 561 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 PEAR1Q5VY43 1037 aaPredicted RBP3.18□□□□□ -1.9
CCDC30-201ENST00000340612 PNMA5Q96PV4 448 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 HHIPQ96QV1 700 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 BCO2Q9BYV7 579 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 IGFLR1Q9H665 355 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 C12orf49Q9H741 205 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 SPG7Q9UQ90 795 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 COL17A1Q9UMD9 1497 aaPredicted RBP3.18□□□□□ -1.9
CCDC30-201ENST00000340612 FAM229AH3BQW9 127 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 FBXO24O75426 580 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 EGFRP00533 1210 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 GRM2Q14416 872 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 GLIPR1L2Q4G1C9 344 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 HFE2Q6ZVN8 426 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 GALNT12Q8IXK2 581 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 NDFIP2Q9NV92 336 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms