RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 FOXP2O15409 715 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 PIH1D3Q9NQM4 214 aaKnown RBP18.45■□□□□ 0.54
MBD1-203ENST00000339998 IDH1O75874 414 aaKnown RBP18.45■□□□□ 0.54
MBD1-203ENST00000339998 TBC1D9BQ66K14 1250 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
MBD1-203ENST00000339998 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 GPT2Q8TD30 523 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 NEK1Q96PY6 1258 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 PSMA5P28066 241 aa18.44■□□□□ 0.54
MBD1-203ENST00000339998 PHF14O94880 888 aa18.44■□□□□ 0.54
MBD1-203ENST00000339998 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
MBD1-203ENST00000339998 GNPATO15228 680 aa18.43■□□□□ 0.54
MBD1-203ENST00000339998 Q6ZUG5 572 aa18.43■□□□□ 0.54
MBD1-203ENST00000339998 HELLSQ9NRZ9 838 aa18.43■□□□□ 0.54
MBD1-203ENST00000339998 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
MBD1-203ENST00000339998 GPHNQ9NQX3 736 aaPredicted RBP18.43■□□□□ 0.54
MBD1-203ENST00000339998 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
MBD1-203ENST00000339998 XRCC6P12956 609 aaKnown RBP eCLIP18.42■□□□□ 0.542e-6■■■■■ 29.9
MBD1-203ENST00000339998 BCAMP50895 628 aa18.42■□□□□ 0.54
MBD1-203ENST00000339998 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
MBD1-203ENST00000339998 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
MBD1-203ENST00000339998 GOLGA6L3A6NEY3 463 aa18.42■□□□□ 0.54
MBD1-203ENST00000339998 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
MBD1-203ENST00000339998 GADD45BO75293 160 aaPredicted RBP18.42■□□□□ 0.54
MBD1-203ENST00000339998 SLC9C2Q5TAH2 1124 aa18.42■□□□□ 0.54
MBD1-203ENST00000339998 BRF1Q92994 677 aa18.42■□□□□ 0.54
MBD1-203ENST00000339998 CCNL1Q9UK58 526 aaPredicted RBP18.42■□□□□ 0.54
MBD1-203ENST00000339998 AKAP11Q9UKA4 1901 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 AFF2P51816 1311 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 STX6O43752 255 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 FAM173BQ6P4H8 233 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
MBD1-203ENST00000339998 JAK2O60674 1132 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 GTF2E1P29083 439 aaPredicted RBP18.41■□□□□ 0.54
MBD1-203ENST00000339998 NKX2-3Q8TAU0 364 aa18.41■□□□□ 0.54
MBD1-203ENST00000339998 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
MBD1-203ENST00000339998 PARP10Q53GL7 1025 aa18.4■□□□□ 0.54
MBD1-203ENST00000339998 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
MBD1-203ENST00000339998 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
MBD1-203ENST00000339998 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
MBD1-203ENST00000339998 SPEF2Q9C093 1822 aa18.4■□□□□ 0.54
MBD1-203ENST00000339998 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
MBD1-203ENST00000339998 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
MBD1-203ENST00000339998 FGFR2P21802 821 aa18.4■□□□□ 0.54
MBD1-203ENST00000339998 PUM3Q15397 648 aaKnown RBP18.4■□□□□ 0.54
MBD1-203ENST00000339998 CCDC152Q4G0S7 254 aa18.4■□□□□ 0.54
MBD1-203ENST00000339998 FOSBP53539 338 aa18.39■□□□□ 0.54
MBD1-203ENST00000339998 FGD1P98174 961 aa18.39■□□□□ 0.54
MBD1-203ENST00000339998 RASGRF1Q13972 1273 aa18.39■□□□□ 0.54
MBD1-203ENST00000339998 KLHL40Q2TBA0 621 aa18.39■□□□□ 0.54
MBD1-203ENST00000339998 TSGA10IPQ3SY00 556 aa18.39■□□□□ 0.54
MBD1-203ENST00000339998 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 E7EWF7 191 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 GPAA1O43292 621 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 FGAP02671 866 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 CHRNDQ07001 517 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
MBD1-203ENST00000339998 APOBRQ0VD83 1088 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 LPIN2Q92539 896 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
MBD1-203ENST00000339998 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
MBD1-203ENST00000339998 CELF1Q92879 486 aaKnown RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 DSCC1Q9BVC3 393 aa18.38■□□□□ 0.53
MBD1-203ENST00000339998 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 ABCC12Q96J65 1359 aa18.38■□□□□ 0.53
MBD1-203ENST00000339998 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 ZSCAN22P10073 491 aaPredicted RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 IGHMBP2P38935 993 aaKnown RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 SKOR2Q2VWA4 1001 aaPredicted RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
MBD1-203ENST00000339998 ZNF652Q9Y2D9 606 aa18.38■□□□□ 0.53
MBD1-203ENST00000339998 CCT2P78371 535 aaKnown RBP18.37■□□□□ 0.53
MBD1-203ENST00000339998 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
MBD1-203ENST00000339998 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 SEPT12Q8IYM1 358 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 APPBP2Q92624 585 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
MBD1-203ENST00000339998 MTMR6Q9Y217 621 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 MROH5Q6ZUA9 1318 aa18.37■□□□□ 0.53
MBD1-203ENST00000339998 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
MBD1-203ENST00000339998 GYG1P46976 350 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 CDC37L1Q7L3B6 337 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
MBD1-203ENST00000339998 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 BTAF1O14981 1849 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 ADD2P35612 726 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 FIBPO43427 364 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 APPP05067 770 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 KRT32Q14532 448 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
MBD1-203ENST00000339998 SPATA5Q8NB90 893 aa18.36■□□□□ 0.53
MBD1-203ENST00000339998 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
MBD1-203ENST00000339998 F13A1P00488 732 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms