RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 GJB2P29033 226 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 COG7P83436 770 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
BRPF3-201ENST00000339717 HNRNPH1P31943 449 aaKnown RBP14.29□□□□□ -0.12
BRPF3-201ENST00000339717 ATG3Q9NT62 314 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 GFM2Q969S9 779 aaKnown RBP14.28□□□□□ -0.12
BRPF3-201ENST00000339717 ZSCAN16Q9H4T2 348 aaPredicted RBP14.28□□□□□ -0.12
BRPF3-201ENST00000339717 ADCY2Q08462 1091 aa14.28□□□□□ -0.12
BRPF3-201ENST00000339717 CA8P35219 290 aa14.28□□□□□ -0.12
BRPF3-201ENST00000339717 EXOSC9Q06265 439 aaKnown RBP14.28□□□□□ -0.12
BRPF3-201ENST00000339717 IFNKQ9P0W0 207 aa14.28□□□□□ -0.12
BRPF3-201ENST00000339717 IFT88Q13099 833 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 KRT32Q14532 448 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 RASSF2P50749 326 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 APOBRQ0VD83 1088 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 KARSQ15046 597 aaKnown RBP14.27□□□□□ -0.12
BRPF3-201ENST00000339717 PARP9Q8IXQ6 854 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 RAB3IL1Q8TBN0 382 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 ZBTB10Q96DT7 871 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 CTAGE1Q96RT6 745 aa14.27□□□□□ -0.12
BRPF3-201ENST00000339717 TTF2Q9UNY4 1162 aaKnown RBP14.27□□□□□ -0.12
BRPF3-201ENST00000339717 CASQ2O14958 399 aaPredicted RBP14.27□□□□□ -0.13
BRPF3-201ENST00000339717 SFSWAPQ12872 951 aaKnown RBP14.27□□□□□ -0.13
BRPF3-201ENST00000339717 LRMPQ12912 555 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.13
BRPF3-201ENST00000339717 PUS7Q96PZ0 661 aaKnown RBP14.27□□□□□ -0.13
BRPF3-201ENST00000339717 FRMD4BQ9Y2L6 1034 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
BRPF3-201ENST00000339717 MATR3P43243 847 aaKnown RBP eCLIP14.27□□□□□ -0.132e-6■■■■□ 23.9
BRPF3-201ENST00000339717 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
BRPF3-201ENST00000339717 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 DRP2Q13474 957 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 UBE4AQ14139 1066 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 CROCCP2Q86T23 111 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 LZICQ8WZA0 190 aa14.27□□□□□ -0.13
BRPF3-201ENST00000339717 KRT86O43790 486 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 ZRANB2O95218 330 aaKnown RBP eCLIP14.26□□□□□ -0.13
BRPF3-201ENST00000339717 EPS15P42566 896 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 PSEN1P49768 467 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 GPT2Q8TD30 523 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 CPLX3Q8WVH0 158 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 KIF9Q9HAQ2 790 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 G3BP2Q9UN86 482 aaKnown RBP14.26□□□□□ -0.13
BRPF3-201ENST00000339717 KRT83P78385 493 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 MYLK4Q86YV6 388 aaPredicted RBP14.26□□□□□ -0.13
BRPF3-201ENST00000339717 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
BRPF3-201ENST00000339717 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
BRPF3-201ENST00000339717 GPRASP1Q5JY77 1395 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 CYLC1P35663 651 aaPredicted RBP14.26□□□□□ -0.13
BRPF3-201ENST00000339717 ZNF131P52739 623 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 CENPKQ9BS16 269 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 HMGXB3Q12766 1538 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 ARHGAP24Q8N264 748 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 SELENOSQ9BQE4 189 aa14.26□□□□□ -0.13
BRPF3-201ENST00000339717 PTPRCP08575 1304 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 GMNNO75496 209 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 TRIM42Q8IWZ5 723 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 SMC6Q96SB8 1091 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 CFTRP13569 1480 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 STAMBPO95630 424 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 SKIP12755 728 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 HPDP32754 393 aaPredicted RBP14.25□□□□□ -0.13
BRPF3-201ENST00000339717 FCHSD1Q86WN1 690 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 MIS12Q9H081 205 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 LZTFL1Q9NQ48 299 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
BRPF3-201ENST00000339717 VIMP08670 466 aaKnown RBP14.25□□□□□ -0.13
BRPF3-201ENST00000339717 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
BRPF3-201ENST00000339717 ANKRD65E5RJM6 399 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 CIB2O75838 187 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 CC2D1AQ6P1N0 951 aaPredicted RBP14.25□□□□□ -0.13
BRPF3-201ENST00000339717 CCDC110Q8TBZ0 833 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 MIEF2Q96C03 454 aa14.25□□□□□ -0.13
BRPF3-201ENST00000339717 B4GALNT2Q8NHY0 566 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 GNAI3P08754 354 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 DNM1Q05193 864 aaKnown RBP14.24□□□□□ -0.13
BRPF3-201ENST00000339717 ACTN3Q08043 901 aaPredicted RBP14.24□□□□□ -0.13
BRPF3-201ENST00000339717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.24□□□□□ -0.13
BRPF3-201ENST00000339717 P3H4Q92791 437 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 KIF1BPQ96EK5 621 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 USP16Q9Y5T5 823 aa14.24□□□□□ -0.13
BRPF3-201ENST00000339717 ICA1Q05084 483 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 SRGAP1Q7Z6B7 1085 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 LRRC45Q96CN5 670 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 ARHGAP22Q7Z5H3 698 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 TEX9Q8N6V9 391 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 FGD4Q96M96 766 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 FERP16591 822 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 XBP1P17861 261 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms