RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ZKSCAN1P17029 563 aaPredicted RBP22.14■■□□□ 1.13
PSPC1-201ENST00000338910 PTGS1P23219 599 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 CREB3L3Q68CJ9 461 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 DZIP3Q86Y13 1208 aaKnown RBP22.14■■□□□ 1.13
PSPC1-201ENST00000338910 FAM200AQ8TCP9 573 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 HAUS7Q99871 368 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 PCCAP05165 728 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-201ENST00000338910 SYCP1Q15431 976 aa22.13■■□□□ 1.13
PSPC1-201ENST00000338910 ZBTB38Q8NAP3 1195 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-201ENST00000338910 A0A0U1RQG5 324 aaPredicted RBP22.12■■□□□ 1.13
PSPC1-201ENST00000338910 LARGE1O95461 756 aa22.12■■□□□ 1.13
PSPC1-201ENST00000338910 SNRKQ9NRH2 765 aa22.12■■□□□ 1.13
PSPC1-201ENST00000338910 GJB2P29033 226 aa22.12■■□□□ 1.13
PSPC1-201ENST00000338910 NLRP10Q86W26 655 aa22.12■■□□□ 1.13
PSPC1-201ENST00000338910 FNBP4Q8N3X1 1017 aaPredicted RBP22.12■■□□□ 1.13
PSPC1-201ENST00000338910 KCNB2Q92953 911 aa22.12■■□□□ 1.13
PSPC1-201ENST00000338910 OGFRQ9NZT2 677 aa22.12■■□□□ 1.13
PSPC1-201ENST00000338910 ITPK1Q13572 414 aa22.11■■□□□ 1.13
PSPC1-201ENST00000338910 INTS5Q6P9B9 1019 aaKnown RBP22.11■■□□□ 1.13
PSPC1-201ENST00000338910 CRKLP46109 303 aaKnown RBP22.11■■□□□ 1.13
PSPC1-201ENST00000338910 PDRG1Q9NUG6 133 aa22.11■■□□□ 1.13
PSPC1-201ENST00000338910 PALLDQ8WX93 1383 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 SLC27A2O14975 620 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 HSP90AB3PQ58FF7 597 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 ZSWIM6Q9HCJ5 1215 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 GPR108Q9NPR9 543 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 CYP46A1Q9Y6A2 500 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 A0A1B0GUL7 405 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 CIAO1O76071 339 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
PSPC1-201ENST00000338910 SEC62Q99442 399 aaKnown RBP22.1■■□□□ 1.13
PSPC1-201ENST00000338910 CCDC87Q9NVE4 849 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 CEP126Q9P2H0 1117 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 USP21Q9UK80 565 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 MED23Q9ULK4 1368 aa22.1■■□□□ 1.13
PSPC1-201ENST00000338910 GOLIM4O00461 696 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 CCDC83Q8IWF9 413 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 CTNNA3Q9UI47 895 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 MRVI1Q9Y6F6 885 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 SMTNL1A8MU46 457 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 TAF5LO75529 589 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 CCDC129Q6ZRS4 1044 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 TM6SF1Q9BZW5 370 aa22.09■■□□□ 1.13
PSPC1-201ENST00000338910 ERVV-1B6SEH8 477 aa22.08■■□□□ 1.13
PSPC1-201ENST00000338910 COL9A3Q14050 684 aaPredicted RBP22.08■■□□□ 1.13
PSPC1-201ENST00000338910 TAF6LQ9Y6J9 622 aa22.08■■□□□ 1.13
PSPC1-201ENST00000338910 TYRO3Q06418 890 aa22.08■■□□□ 1.12
PSPC1-201ENST00000338910 IFIT5Q13325 482 aaKnown RBP22.08■■□□□ 1.12
PSPC1-201ENST00000338910 MAP3K11Q16584 847 aa22.08■■□□□ 1.12
PSPC1-201ENST00000338910 VPS53Q5VIR6 699 aa22.08■■□□□ 1.12
PSPC1-201ENST00000338910 CCDC186Q7Z3E2 898 aa22.08■■□□□ 1.12
PSPC1-201ENST00000338910 NUP98P52948 1817 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 IGSF3O75054 1194 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 CSF1RP07333 972 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 SLFNL1Q499Z3 407 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 LUZP1Q86V48 1076 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 PLA2G12BQ9BX93 195 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 PAG1Q9NWQ8 432 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 TRMT112Q9UI30 125 aaKnown RBP22.07■■□□□ 1.12
PSPC1-201ENST00000338910 SPATA31A6Q5VVP1 1343 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 LRMPQ12912 555 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 RNF20Q5VTR2 975 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 TTC6Q86TZ1 520 aa22.07■■□□□ 1.12
PSPC1-201ENST00000338910 C16orf45Q96MC5 204 aaPredicted RBP22.07■■□□□ 1.12
PSPC1-201ENST00000338910 DTNBO60941 627 aa22.06■■□□□ 1.12
PSPC1-201ENST00000338910 ST3GAL1Q11201 340 aa22.06■■□□□ 1.12
PSPC1-201ENST00000338910 CERKQ8TCT0 537 aa22.06■■□□□ 1.12
PSPC1-201ENST00000338910 NUP62CLQ9H1M0 184 aa22.06■■□□□ 1.12
PSPC1-201ENST00000338910 SH2B1Q9NRF2 756 aaPredicted RBP22.06■■□□□ 1.12
PSPC1-201ENST00000338910 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
PSPC1-201ENST00000338910 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
PSPC1-201ENST00000338910 ZSCAN31Q96LW9 406 aaPredicted RBP22.06■■□□□ 1.12
PSPC1-201ENST00000338910 ZNF609O15014 1411 aa22.05■■□□□ 1.12
PSPC1-201ENST00000338910 IFIT1P09914 478 aaKnown RBP22.05■■□□□ 1.12
PSPC1-201ENST00000338910 MCMDC2Q4G0Z9 681 aa22.05■■□□□ 1.12
PSPC1-201ENST00000338910 SMARCC1Q92922 1105 aaPredicted RBP22.05■■□□□ 1.12
PSPC1-201ENST00000338910 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
PSPC1-201ENST00000338910 ELP1O95163 1332 aa22.05■■□□□ 1.12
PSPC1-201ENST00000338910 VPS37CA5D8V6 355 aaPredicted RBP22.05■■□□□ 1.12
PSPC1-201ENST00000338910 LIG1P18858 919 aa22.05■■□□□ 1.12
PSPC1-201ENST00000338910 TTLL11Q8NHH1 800 aa22.05■■□□□ 1.12
PSPC1-201ENST00000338910 TCEANC2Q96MN5 208 aa22.05■■□□□ 1.12
PSPC1-201ENST00000338910 DDX41Q9UJV9 622 aaKnown RBP22.05■■□□□ 1.12
PSPC1-201ENST00000338910 CDHR2Q9BYE9 1310 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 PSMA5P28066 241 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 KCNQ4P56696 695 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 GABPB1Q06547 395 aaPredicted RBP22.04■■□□□ 1.12
PSPC1-201ENST00000338910 GORABQ5T7V8 394 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 PLA2G4DQ86XP0 818 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 ZNF34Q8IZ26 560 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 GREM2Q9H772 168 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 CBX8Q9HC52 389 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 IRS4O14654 1257 aaPredicted RBP22.04■■□□□ 1.12
PSPC1-201ENST00000338910 TNNT1P13805 278 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 ADORA1P30542 326 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 FAM182BQ5T319 152 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 ZSCAN25Q6NSZ9 544 aa22.04■■□□□ 1.12
PSPC1-201ENST00000338910 NRBP1Q9UHY1 535 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms