RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
PRKN-201ENST00000338468 IRS2Q9Y4H2 1338 aa19.22■□□□□ 0.67
PRKN-201ENST00000338468 SHTN1A0MZ66 631 aa19.21■□□□□ 0.67
PRKN-201ENST00000338468 SNAP23O00161 211 aa19.21■□□□□ 0.67
PRKN-201ENST00000338468 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
PRKN-201ENST00000338468 HELBQ8NG08 1087 aaPredicted RBP19.21■□□□□ 0.67
PRKN-201ENST00000338468 BEGAINQ9BUH8 593 aa19.21■□□□□ 0.67
PRKN-201ENST00000338468 ZNF804BA4D1E1 1349 aa19.21■□□□□ 0.67
PRKN-201ENST00000338468 TAF5LO75529 589 aa19.2■□□□□ 0.66
PRKN-201ENST00000338468 TRIM27P14373 513 aa19.2■□□□□ 0.66
PRKN-201ENST00000338468 ECE1P42892 770 aa19.2■□□□□ 0.66
PRKN-201ENST00000338468 INTS3Q68E01 1043 aaKnown RBP19.2■□□□□ 0.66
PRKN-201ENST00000338468 LDHAL6AQ6ZMR3 332 aa19.2■□□□□ 0.66
PRKN-201ENST00000338468 PUS3Q9BZE2 481 aaKnown RBP19.2■□□□□ 0.66
PRKN-201ENST00000338468 PSME4Q14997 1843 aa19.2■□□□□ 0.66
PRKN-201ENST00000338468 ZNF646O15015 1829 aaPredicted RBP19.19■□□□□ 0.66
PRKN-201ENST00000338468 VIL1P09327 827 aaKnown RBP19.19■□□□□ 0.66
PRKN-201ENST00000338468 ADARB2Q9NS39 739 aaKnown RBP19.19■□□□□ 0.66
PRKN-201ENST00000338468 TAF7LQ5H9L4 462 aa19.18■□□□□ 0.66
PRKN-201ENST00000338468 ATF7IPQ6VMQ6 1270 aa19.18■□□□□ 0.66
PRKN-201ENST00000338468 USP50Q70EL3 339 aaPredicted RBP19.18■□□□□ 0.66
PRKN-201ENST00000338468 DPF2Q92785 391 aa19.18■□□□□ 0.66
PRKN-201ENST00000338468 CAPNS2Q96L46 248 aa19.18■□□□□ 0.66
PRKN-201ENST00000338468 CNNM1Q9NRU3 951 aa19.18■□□□□ 0.66
PRKN-201ENST00000338468 CNOT7Q9UIV1 285 aaKnown RBP19.18■□□□□ 0.66
PRKN-201ENST00000338468 RIPOR2Q9Y4F9 1068 aa19.18■□□□□ 0.66
PRKN-201ENST00000338468 G3V3G9 751 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 IPO8O15397 1037 aaKnown RBP19.17■□□□□ 0.66
PRKN-201ENST00000338468 SLC34A2O95436 690 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
PRKN-201ENST00000338468 HIRAP54198 1017 aaPredicted RBP19.17■□□□□ 0.66
PRKN-201ENST00000338468 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 PODNQ7Z5L7 613 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 MICALL2Q8IY33 904 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 TRPM4Q8TD43 1214 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 FRAT1Q92837 279 aaPredicted RBP19.17■□□□□ 0.66
PRKN-201ENST00000338468 MEIS3Q99687 375 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 ZNF609O15014 1411 aa19.17■□□□□ 0.66
PRKN-201ENST00000338468 UBTFL1P0CB47 393 aaPredicted RBP19.16■□□□□ 0.66
PRKN-201ENST00000338468 GRM1Q13255 1194 aa19.16■□□□□ 0.66
PRKN-201ENST00000338468 LRRC24Q50LG9 513 aa19.16■□□□□ 0.66
PRKN-201ENST00000338468 C15orf52Q6ZUT6 534 aaKnown RBP19.16■□□□□ 0.66
PRKN-201ENST00000338468 KLHDC4Q8TBB5 520 aa19.16■□□□□ 0.66
PRKN-201ENST00000338468 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
PRKN-201ENST00000338468 RPS12P25398 132 aaKnown RBP19.15■□□□□ 0.66
PRKN-201ENST00000338468 RSBN1LQ6PCB5 846 aaPredicted RBP19.15■□□□□ 0.66
PRKN-201ENST00000338468 GMLQ99445 158 aa19.15■□□□□ 0.66
PRKN-201ENST00000338468 TRPM7Q96QT4 1865 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 USP17L3A6NCW0 530 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 USP17L4A6NCW7 530 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 PLIN1O60240 522 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 EGFRP00533 1210 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 KCNJ4P48050 445 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 CYP4F22Q6NT55 531 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 USP17L1Q7RTZ2 530 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 PGAP2Q9UHJ9 254 aa19.14■□□□□ 0.65
PRKN-201ENST00000338468 LRRFIP2Q9Y608 721 aaKnown RBP19.14■□□□□ 0.65
PRKN-201ENST00000338468 TRAF5O00463 557 aa19.13■□□□□ 0.65
PRKN-201ENST00000338468 FMR1Q06787 632 aaKnown RBP eCLIP19.13■□□□□ 0.65
PRKN-201ENST00000338468 ZKSCAN2Q63HK3 967 aa19.13■□□□□ 0.65
PRKN-201ENST00000338468 SAMD7Q7Z3H4 446 aa19.13■□□□□ 0.65
PRKN-201ENST00000338468 MXD3Q9BW11 206 aa19.13■□□□□ 0.65
PRKN-201ENST00000338468 TLL2Q9Y6L7 1015 aa19.13■□□□□ 0.65
PRKN-201ENST00000338468 CCDC85CA6NKD9 419 aa19.12■□□□□ 0.65
PRKN-201ENST00000338468 H7C1D1 291 aa19.12■□□□□ 0.65
PRKN-201ENST00000338468 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
PRKN-201ENST00000338468 DACT2Q5SW24 774 aa19.12■□□□□ 0.65
PRKN-201ENST00000338468 VGLL2Q8N8G2 317 aa19.12■□□□□ 0.65
PRKN-201ENST00000338468 AGBL3Q8NEM8 1001 aa19.12■□□□□ 0.65
PRKN-201ENST00000338468 CD209Q9NNX6 404 aa19.12■□□□□ 0.65
PRKN-201ENST00000338468 MROH5Q6ZUA9 1318 aa19.11■□□□□ 0.65
PRKN-201ENST00000338468 ZNF280AP59817 542 aaPredicted RBP19.11■□□□□ 0.65
PRKN-201ENST00000338468 MLLT1Q03111 559 aaPredicted RBP19.11■□□□□ 0.65
PRKN-201ENST00000338468 TBC1D10BQ4KMP7 808 aaPredicted RBP19.11■□□□□ 0.65
PRKN-201ENST00000338468 CST9Q5W186 159 aa19.11■□□□□ 0.65
PRKN-201ENST00000338468 TMEM57Q8N5G2 664 aa19.11■□□□□ 0.65
PRKN-201ENST00000338468 MAP2K2P36507 400 aa19.1■□□□□ 0.65
PRKN-201ENST00000338468 UBE4AQ14139 1066 aa19.1■□□□□ 0.65
PRKN-201ENST00000338468 STRIP1Q5VSL9 837 aa19.1■□□□□ 0.65
PRKN-201ENST00000338468 EYA2O00167 538 aa19.09■□□□□ 0.65
PRKN-201ENST00000338468 CA12O43570 354 aa19.09■□□□□ 0.65
PRKN-201ENST00000338468 GNAI3P08754 354 aa19.09■□□□□ 0.65
PRKN-201ENST00000338468 RLBP1P12271 317 aa19.09■□□□□ 0.65
PRKN-201ENST00000338468 IL1R1P14778 569 aa19.09■□□□□ 0.65
PRKN-201ENST00000338468 ATG9AQ7Z3C6 839 aa19.09■□□□□ 0.65
PRKN-201ENST00000338468 ZC3H15Q8WU90 426 aaKnown RBP19.09■□□□□ 0.65
PRKN-201ENST00000338468 AOC2O75106 756 aa19.08■□□□□ 0.64
PRKN-201ENST00000338468 GTF2IP78347 998 aa19.08■□□□□ 0.64
PRKN-201ENST00000338468 METTL24Q5JXM2 366 aa19.08■□□□□ 0.64
PRKN-201ENST00000338468 RBM26Q5T8P6 1007 aaKnown RBP19.08■□□□□ 0.64
PRKN-201ENST00000338468 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.64
PRKN-201ENST00000338468 TSKSQ9UJT2 592 aa19.08■□□□□ 0.64
PRKN-201ENST00000338468 PDE8BO95263 885 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 CELF2O95319 508 aaKnown RBP19.07■□□□□ 0.64
PRKN-201ENST00000338468 USP17L8P0C7I0 530 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 MTX1Q13505 466 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 KIF4BQ2VIQ3 1234 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 ZNF804AQ7Z570 1209 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 SAPCD2Q86UD0 394 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms