RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 PES1O00541 588 aaKnown RBP10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 MPNDQ8N594 471 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 KDM4AO75164 1064 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 NF2P35240 595 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 SDF4Q9BRK5 362 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 PROSER3Q2NL68 480 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 CACNA1FO60840 1977 aa10.9□□□□□ -0.66
FNDC3B-201ENST00000336824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 F8W031 263 aaPredicted RBP10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 TSPY3P0CV98 308 aa10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 TSPY8P0CW00 308 aa10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 ATP2B4P23634 1241 aa10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 UPF3BQ9BZI7 483 aaKnown RBP10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 CCDC171Q6TFL3 1326 aa10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 TIMM10P62072 90 aa10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 SSRP1Q08945 709 aaKnown RBP10.9□□□□□ -0.67
FNDC3B-201ENST00000336824 CIAO1O76071 339 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 EHMT1Q9H9B1 1298 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 FAM182BQ5T319 152 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 OLFM4Q6UX06 510 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 ATP10DQ9P241 1426 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 NMIQ13287 307 aaPredicted RBP10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 NLRP10Q86W26 655 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 RBM8AQ9Y5S9 174 aaKnown RBP10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 ATP2B1P20020 1258 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 C2CD5Q86YS7 1000 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 GOLGA8AA7E2F4 631 aa10.89□□□□□ -0.67
FNDC3B-201ENST00000336824 LARGE2Q8N3Y3 721 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 WTAPQ15007 396 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 XRN1Q8IZH2 1706 aaKnown RBP10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 CUL5Q93034 780 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 PHLPP1O60346 1717 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 HAND2P61296 217 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 TBC1D32Q96NH3 1257 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 COL15A1P39059 1388 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 GNAQP50148 359 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 ZNF76P36508 570 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 IFIT1BQ5T764 474 aaKnown RBP10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 HOOK2Q96ED9 719 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 C8orf76Q96K31 380 aa10.88□□□□□ -0.67
FNDC3B-201ENST00000336824 CCDC83Q8IWF9 413 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 FAM13BQ9NYF5 915 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 NALCNQ8IZF0 1738 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 TNIP1Q15025 636 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 APPBP2Q92624 585 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 SERPINB2P05120 415 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 BBOX1O75936 387 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 KLHDC4Q8TBB5 520 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 DBNDD2Q9BQY9 259 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 METAP2P50579 478 aaKnown RBP eCLIP10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 TTC6Q86TZ1 520 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 ME1P48163 572 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 SPATA5Q8NB90 893 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 MCM9Q9NXL9 1143 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 NARFQ9UHQ1 456 aa10.87□□□□□ -0.67
FNDC3B-201ENST00000336824 ATP5JP18859 108 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 KBTBD3Q8NAB2 608 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 LEMD3Q9Y2U8 911 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 FIBPO43427 364 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 TAF5LO75529 589 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 CHMLP26374 656 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 PICALMQ13492 652 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 XDHP47989 1333 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 STX8Q9UNK0 236 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 RTL9Q8NET4 1388 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 PLEKHG2Q9H7P9 1386 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 CARMIL3Q8ND23 1372 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 PRAMEF22A3QJZ6 481 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 CALM1P0DP23 149 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 CALM2P0DP24 149 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 CALM3P0DP25 149 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 VEZTQ9HBM0 779 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 GPR108Q9NPR9 543 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 NRXN3Q9Y4C0 1643 aa10.86□□□□□ -0.67
FNDC3B-201ENST00000336824 DDX11Q96FC9 970 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 CYP19A1P11511 503 aaPredicted RBP10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 PPIP5K2O43314 1243 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 TEX11Q8IYF3 940 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 IARSP41252 1262 aaKnown RBP10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 UBE4AQ14139 1066 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 GREM2Q9H772 168 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 SPATA32Q96LK8 384 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 IQSEC2Q5JU85 1478 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 ZBTB43O43298 467 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 SKAP1Q86WV1 359 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 CCDC24Q8N4L8 307 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 MIGA1Q8NAN2 632 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 RAB34Q9BZG1 259 aa10.85□□□□□ -0.67
FNDC3B-201ENST00000336824 SEMA3EO15041 775 aa10.84□□□□□ -0.67
FNDC3B-201ENST00000336824 CEBPZQ03701 1054 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms