RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 BRF1Q92994 677 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 NEK1Q96PY6 1258 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 CARD10Q9BWT7 1032 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 SOS2Q07890 1332 aaPredicted RBP16.35■□□□□ 0.21
SF1-202ENST00000334944 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
SF1-202ENST00000334944 TAOK2Q9UL54 1235 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 EYA2O00167 538 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 LRMPQ12912 555 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
SF1-202ENST00000334944 PTGS1P23219 599 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 TERF2Q15554 542 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 TIGD1Q96MW7 591 aa16.34■□□□□ 0.21
SF1-202ENST00000334944 GLI3P10071 1580 aa16.33■□□□□ 0.21
SF1-202ENST00000334944 CTIFO43310 598 aaKnown RBP16.33■□□□□ 0.21
SF1-202ENST00000334944 HLFQ16534 295 aa16.33■□□□□ 0.21
SF1-202ENST00000334944 CAMK4Q16566 473 aa16.33■□□□□ 0.21
SF1-202ENST00000334944 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
SF1-202ENST00000334944 CCDC191Q8NCU4 936 aa16.33■□□□□ 0.2
SF1-202ENST00000334944 LMTK3Q96Q04 1460 aa16.33■□□□□ 0.2
SF1-202ENST00000334944 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
SF1-202ENST00000334944 KDM4AO75164 1064 aa16.32■□□□□ 0.2
SF1-202ENST00000334944 HAND2P61296 217 aa16.32■□□□□ 0.2
SF1-202ENST00000334944 UBE2HP62256 183 aa16.32■□□□□ 0.2
SF1-202ENST00000334944 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
SF1-202ENST00000334944 SCARF1Q14162 830 aa16.32■□□□□ 0.2
SF1-202ENST00000334944 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
SF1-202ENST00000334944 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
SF1-202ENST00000334944 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SF1-202ENST00000334944 DDX41Q9UJV9 622 aaKnown RBP16.32■□□□□ 0.2
SF1-202ENST00000334944 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
SF1-202ENST00000334944 GABPB1Q06547 395 aaPredicted RBP16.31■□□□□ 0.2
SF1-202ENST00000334944 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
SF1-202ENST00000334944 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
SF1-202ENST00000334944 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
SF1-202ENST00000334944 APOBRQ0VD83 1088 aa16.31■□□□□ 0.2
SF1-202ENST00000334944 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
SF1-202ENST00000334944 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
SF1-202ENST00000334944 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
SF1-202ENST00000334944 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
SF1-202ENST00000334944 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
SF1-202ENST00000334944 WASHC4Q2M389 1173 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 USPL1Q5W0Q7 1092 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 HMG20BQ9P0W2 317 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 M0R2C6 588 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 CCDC66A2RUB6 948 aa16.3■□□□□ 0.2
SF1-202ENST00000334944 U3KPZ7 1027 aaPredicted RBP16.3■□□□□ 0.2
SF1-202ENST00000334944 PHF14O94880 888 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 KIF18AQ8NI77 898 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 MAST3O60307 1309 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 LIG1P18858 919 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 GUCY1B3Q02153 619 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 OSBP2Q969R2 916 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
SF1-202ENST00000334944 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
SF1-202ENST00000334944 SCRN1Q12765 414 aa16.28■□□□□ 0.2
SF1-202ENST00000334944 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
SF1-202ENST00000334944 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
SF1-202ENST00000334944 TNNT1P13805 278 aa16.28■□□□□ 0.2
SF1-202ENST00000334944 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■■□ 23.1
SF1-202ENST00000334944 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
SF1-202ENST00000334944 SNAP23O00161 211 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 UVSSAQ2YD98 709 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
SF1-202ENST00000334944 GTF3C6Q969F1 213 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 GREM2Q9H772 168 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 ZBTB1Q9Y2K1 713 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 ZAP70P43403 619 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 KRT85P78386 507 aa16.27■□□□□ 0.2
SF1-202ENST00000334944 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.19
SF1-202ENST00000334944 KRT32Q14532 448 aa16.27■□□□□ 0.19
SF1-202ENST00000334944 DRC7Q8IY82 874 aa16.27■□□□□ 0.19
SF1-202ENST00000334944 JCADQ9P266 1359 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 H3BQV1 296 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 CCDC186Q7Z3E2 898 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 RNF113AO15541 343 aaKnown RBP16.26■□□□□ 0.19
SF1-202ENST00000334944 KMT5BQ4FZB7 885 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 KRT222Q8N1A0 295 aa16.26■□□□□ 0.19
SF1-202ENST00000334944 E7EWF7 191 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 IRX3P78415 501 aaPredicted RBP16.25■□□□□ 0.19
SF1-202ENST00000334944 METTL24Q5JXM2 366 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 SPATA32Q96LK8 384 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms